| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxa9a | 0.387 | stm | -0.100 |
| hoxa11b | 0.358 | aldob | -0.098 |
| hoxd9a | 0.349 | marcksl1b | -0.095 |
| hoxb10a | 0.346 | tbx16 | -0.091 |
| hoxd10a | 0.334 | si:ch211-152c2.3 | -0.090 |
| hoxa10b | 0.334 | epcam | -0.086 |
| BX005254.3 | 0.290 | shisa2a | -0.083 |
| hoxb9a | 0.288 | s100a1 | -0.083 |
| gdf11 | 0.286 | acin1b | -0.082 |
| hoxd11a | 0.264 | chrd | -0.081 |
| fam49al | 0.262 | si:ch73-160h15.3 | -0.081 |
| hoxa11a | 0.261 | fscn1a | -0.080 |
| BX001014.2 | 0.260 | ddx4 | -0.079 |
| hoxc10a | 0.260 | pou5f3 | -0.079 |
| hoxd12a | 0.259 | ndr2 | -0.078 |
| hoxb7a | 0.259 | insb | -0.078 |
| cdaa | 0.258 | si:dkey-66i24.9 | -0.078 |
| hoxc11a | 0.256 | zgc:56699 | -0.077 |
| si:ch211-129o18.4 | 0.250 | cst3 | -0.076 |
| fgf20a | 0.244 | cfl1l | -0.076 |
| hoxc3a | 0.239 | nnr | -0.076 |
| fzd10 | 0.237 | add3b | -0.076 |
| alpi.1 | 0.233 | h1m | -0.074 |
| myclb | 0.233 | gsc | -0.074 |
| hoxc6b | 0.232 | si:dkey-92i17.2 | -0.072 |
| her12 | 0.230 | snrpa | -0.071 |
| fgf4 | 0.226 | otx2a | -0.070 |
| hoxd3a | 0.218 | si:ch1073-80i24.3 | -0.070 |
| mnx2b | 0.216 | polr2gl | -0.070 |
| wnt2bb | 0.215 | si:ch211-226h8.14 | -0.070 |
| sall4 | 0.215 | si:dkeyp-2e4.3 | -0.070 |
| hoxc11b | 0.214 | si:ch211-173m16.2 | -0.069 |
| aplnr2 | 0.209 | klf17 | -0.069 |
| hoxc8a | 0.208 | si:dkeyp-114g9.1 | -0.069 |
| sst6 | 0.206 | si:ch1073-190k2.1 | -0.069 |