| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.231 | pvalb1 | -0.088 |
| BX005254.3 | 0.215 | ckbb | -0.085 |
| XLOC-042222 | 0.202 | eef1da | -0.084 |
| XLOC-001964 | 0.199 | pvalb2 | -0.084 |
| hoxd10a | 0.196 | krtt1c19e | -0.081 |
| CABZ01075068.1 | 0.193 | fabp7a | -0.076 |
| lin28a | 0.191 | anxa1a | -0.074 |
| her1 | 0.178 | krt91 | -0.072 |
| BX001014.2 | 0.176 | celf2 | -0.071 |
| hoxd12a | 0.176 | pycard | -0.070 |
| hoxb7a | 0.169 | stmn1b | -0.070 |
| cdx4 | 0.166 | krt4 | -0.069 |
| greb1 | 0.166 | cotl1 | -0.068 |
| hoxc3a | 0.162 | icn | -0.068 |
| tspan7 | 0.158 | gpm6ab | -0.067 |
| cx43.4 | 0.157 | si:dkey-33c14.3 | -0.067 |
| hoxa11b | 0.157 | s100a10b | -0.066 |
| zbtb16a | 0.157 | wu:fa03e10 | -0.066 |
| apela | 0.156 | si:ch211-105c13.3 | -0.065 |
| hoxa10b | 0.154 | gapdhs | -0.064 |
| ldlrad2 | 0.151 | krt5 | -0.064 |
| XLOC-032526 | 0.149 | wu:fb18f06 | -0.064 |
| id1 | 0.148 | anxa2a | -0.063 |
| nid2a | 0.148 | cyt1 | -0.063 |
| fbln1 | 0.148 | gpm6aa | -0.063 |
| hoxa11a | 0.147 | icn2 | -0.063 |
| BX005254.2 | 0.145 | actc1b | -0.062 |
| BX927258.1 | 0.145 | atp5if1b | -0.062 |
| mfap2 | 0.143 | rhbg | -0.061 |
| hoxc6b | 0.141 | tcnbb | -0.061 |
| XLOC-001603 | 0.141 | tmsb | -0.061 |
| tpm4a | 0.139 | tmsb1 | -0.061 |
| hoxd9a | 0.138 | s100v2 | -0.059 |
| hoxd11a | 0.136 | si:ch211-195b11.3 | -0.059 |
| mllt3 | 0.136 | caspb | -0.058 |