| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc11b | 0.416 | celf2 | -0.059 |
| hoxd10a | 0.411 | si:ch211-195b11.3 | -0.043 |
| hoxc11a | 0.410 | cldnb | -0.042 |
| hoxd11a | 0.384 | icn | -0.042 |
| hoxa11b | 0.383 | fabp7a | -0.041 |
| hoxc12b | 0.379 | icn2 | -0.041 |
| hoxa11a | 0.371 | anxa2a | -0.040 |
| hoxa10b | 0.370 | lye | -0.040 |
| hoxb10a | 0.367 | pycard | -0.040 |
| hoxd13a | 0.346 | selenow2b | -0.040 |
| hoxd9a | 0.322 | wu:fb18f06 | -0.040 |
| hoxc13a | 0.303 | agr1 | -0.039 |
| hoxc10a | 0.302 | krtt1c19e | -0.039 |
| hoxc12a | 0.301 | scel | -0.039 |
| hoxa13b | 0.295 | si:ch211-105c13.3 | -0.039 |
| hoxa9b | 0.272 | zgc:193505 | -0.039 |
| hoxc13b | 0.269 | cldne | -0.038 |
| hoxa9a | 0.252 | krt17 | -0.038 |
| BX005254.3 | 0.236 | mgst1.2 | -0.038 |
| hoxb9a | 0.233 | spint2 | -0.038 |
| hoxb7a | 0.210 | tmem176l.4 | -0.038 |
| hoxa13a | 0.204 | anxa1c | -0.037 |
| her1 | 0.189 | cd9b | -0.037 |
| BX005254.2 | 0.185 | s100w | -0.037 |
| hoxc3a | 0.183 | si:ch211-125o16.4 | -0.037 |
| hoxd3a | 0.182 | si:ch211-207n23.2 | -0.037 |
| si:dkeyp-110a12.4 | 0.182 | si:ch73-52f15.5 | -0.037 |
| cdx4 | 0.178 | wu:fa03e10 | -0.037 |
| sall4 | 0.176 | rorb | -0.037 |
| hoxc6b | 0.174 | apodb | -0.036 |
| hoxc9a | 0.169 | caspb | -0.036 |
| ldlrad2 | 0.164 | dhrs13a.2 | -0.036 |
| XLOC-042222 | 0.159 | krt5 | -0.036 |
| mllt3 | 0.155 | ppl | -0.036 |
| XLOC-001964 | 0.143 | s100a10b | -0.036 |