Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.275 | celf2 | -0.047 |
| BX005254.3 | 0.271 | pvalb1 | -0.042 |
| hoxd10a | 0.240 | pvalb2 | -0.041 |
| hoxb7a | 0.219 | fabp3 | -0.038 |
| cdx4 | 0.218 | fabp7a | -0.038 |
| BX001014.2 | 0.212 | ckbb | -0.036 |
| hoxa10b | 0.206 | hbbe1.3 | -0.034 |
| her1 | 0.200 | eef1da | -0.033 |
| hoxd9a | 0.198 | actc1b | -0.032 |
| hoxa11b | 0.192 | gapdhs | -0.031 |
| hoxd12a | 0.185 | gpm6aa | -0.031 |
| hoxc3a | 0.172 | hbae3 | -0.031 |
| hoxa9a | 0.171 | stmn1b | -0.031 |
| hoxa9b | 0.171 | hbae1.1 | -0.029 |
| hoxd11a | 0.170 | icn | -0.029 |
| hoxa11a | 0.168 | krtt1c19e | -0.029 |
| hoxb9a | 0.157 | gpm6ab | -0.028 |
| hoxc6b | 0.152 | tmsb | -0.028 |
| hoxc8a | 0.148 | mylpfa | -0.027 |
| sall4 | 0.145 | rtn1a | -0.026 |
| hoxc9a | 0.144 | cotl1 | -0.025 |
| hoxc11b | 0.142 | eif4a1b | -0.025 |
| her7 | 0.141 | krt91 | -0.025 |
| myf5 | 0.139 | mab21l1 | -0.025 |
| hoxc11a | 0.138 | sod1 | -0.025 |
| nradd | 0.137 | wu:fb55g09 | -0.025 |
| hoxc10a | 0.135 | hbbe1.1 | -0.024 |
| BX927395.1 | 0.134 | myhz1.1 | -0.024 |
| znfl1k | 0.134 | anxa1a | -0.023 |
| XLOC-042222 | 0.132 | CU467822.1 | -0.023 |
| msgn1 | 0.131 | icn2 | -0.023 |
| XLOC-001964 | 0.131 | mylz3 | -0.023 |
| mllt3 | 0.128 | prdx2 | -0.023 |
| fgf8a | 0.125 | rbp4 | -0.023 |
| tbx16l | 0.120 | fscn1a | -0.022 |