| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbx16l | 0.721 | fabp3 | -0.132 |
| tbx16 | 0.551 | tuba1c | -0.110 |
| her7 | 0.524 | calm1a | -0.110 |
| cdx1a | 0.479 | wu:fb55g09 | -0.107 |
| cdx4 | 0.478 | gapdhs | -0.105 |
| myf5 | 0.475 | pvalb1 | -0.102 |
| im:7138239 | 0.473 | marcksl1a | -0.102 |
| her1 | 0.448 | ccni | -0.100 |
| rbm38 | 0.403 | hbbe1.3 | -0.099 |
| mespaa | 0.397 | ckbb | -0.098 |
| snai1a | 0.386 | gpm6aa | -0.098 |
| tbx6 | 0.379 | pvalb2 | -0.098 |
| apoc1 | 0.370 | prdx2 | -0.097 |
| vox | 0.368 | krt4 | -0.096 |
| mespab | 0.365 | rtn1a | -0.095 |
| BX001014.2 | 0.344 | eif4a1b | -0.093 |
| wu:fb97g03 | 0.329 | rnasekb | -0.093 |
| ripply2 | 0.328 | cyt1 | -0.092 |
| hspb1 | 0.326 | hbae3 | -0.092 |
| efnb2b | 0.316 | stmn1b | -0.091 |
| BX005254.3 | 0.305 | elavl3 | -0.089 |
| ved | 0.303 | gnb1a | -0.087 |
| hoxb7a | 0.302 | hbae1.1 | -0.087 |
| BX276101.1 | 0.291 | nova2 | -0.086 |
| cx43.4 | 0.286 | actc1b | -0.085 |
| sp5l | 0.283 | atp6v1e1b | -0.085 |
| BX927327.1 | 0.282 | celf2 | -0.084 |
| vent | 0.271 | gpm6ab | -0.084 |
| fgf17 | 0.267 | si:ch1073-429i10.3.1 | -0.084 |
| BX927258.1 | 0.265 | atp6v1g1 | -0.083 |
| aplnra | 0.264 | cyt1l | -0.083 |
| wnt5b | 0.261 | mdkb | -0.083 |
| si:dkeyp-2e4.3 | 0.259 | atp5if1b | -0.081 |
| hes6 | 0.258 | icn | -0.080 |
| cmtm6 | 0.257 | atp6v0cb | -0.078 |