hairy-related 1
ZFIN 
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| her7 | 0.491 | fabp3 | -0.091 |
| msgn1 | 0.448 | sparc | -0.054 |
| tbx6 | 0.442 | foxp4 | -0.052 |
| ripply2 | 0.416 | fabp7a | -0.048 |
| tbx16l | 0.416 | pvalb1 | -0.048 |
| myf5 | 0.407 | tuba1c | -0.047 |
| pcdh8 | 0.360 | pvalb2 | -0.046 |
| BX005254.3 | 0.346 | celf2 | -0.045 |
| hoxb10a | 0.318 | eef1da | -0.044 |
| BX001014.2 | 0.300 | wu:fb55g09 | -0.043 |
| znfl1k | 0.300 | mdkb | -0.042 |
| hoxd10a | 0.283 | nova2 | -0.042 |
| mespaa | 0.280 | mex3b | -0.041 |
| apoc1 | 0.248 | msi1 | -0.041 |
| tcf15 | 0.242 | si:ch211-137a8.4 | -0.041 |
| her11 | 0.240 | eif4a1b | -0.039 |
| hoxb7a | 0.234 | elavl3 | -0.039 |
| meox1 | 0.234 | tmsb | -0.039 |
| mespab | 0.234 | col1a2 | -0.038 |
| nid2a | 0.229 | gpm6aa | -0.038 |
| fn1b | 0.228 | tuba1a | -0.038 |
| XLOC-042222 | 0.227 | gapdhs | -0.037 |
| hoxa11a | 0.220 | sox3 | -0.037 |
| dlc | 0.218 | ckbb | -0.036 |
| itm2cb | 0.217 | cotl1 | -0.036 |
| has2 | 0.215 | fscn1a | -0.036 |
| unc45b | 0.215 | krt8 | -0.036 |
| XLOC-039166 | 0.213 | actc1b | -0.035 |
| cdx4 | 0.206 | krt4 | -0.035 |
| BX005254.2 | 0.200 | lfng | -0.035 |
| BX276101.1 | 0.193 | pmp22a | -0.035 |
| hoxa11b | 0.192 | tox | -0.035 |
| snai1a | 0.191 | XLOC-003689 | -0.035 |
| htr5aa | 0.190 | hbbe1.3 | -0.034 |
| hoxd12a | 0.189 | icn | -0.034 |