Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxd9a | 0.104 | marcksl1a | -0.029 |
| BX005254.3 | 0.096 | celf2 | -0.027 |
| hoxb10a | 0.096 | CR383676.1 | -0.027 |
| cdx4 | 0.096 | ptmaa | -0.025 |
| hoxb7a | 0.093 | rps10 | -0.025 |
| hoxa9b | 0.089 | tuba1c | -0.024 |
| hoxa9a | 0.085 | rpl37 | -0.024 |
| hoxc10a | 0.080 | zgc:114188 | -0.023 |
| tlr20.2 | 0.075 | nova2 | -0.022 |
| hoxc6b | 0.074 | tmsb4x | -0.022 |
| hoxc8a | 0.073 | h3f3a | -0.022 |
| hoxc11a | 0.072 | hmgb3a | -0.021 |
| hoxc9a | 0.069 | marcksl1b | -0.020 |
| LOC101885785 | 0.069 | rtn1a | -0.020 |
| hoxa11b | 0.067 | stmn1b | -0.019 |
| hoxd10a | 0.067 | nme2b.1 | -0.019 |
| gig2h | 0.066 | mt-nd1 | -0.019 |
| hoxc12a | 0.061 | ppiab | -0.018 |
| cdx1a | 0.060 | gpm6aa | -0.018 |
| LOC101884142 | 0.060 | fabp3 | -0.018 |
| hoxb9a | 0.060 | mt-co2 | -0.018 |
| BX001014.2 | 0.059 | si:dkey-276j7.1 | -0.018 |
| hoxa10b | 0.059 | mbd3b | -0.018 |
| ccr12b.2 | 0.059 | tmsb | -0.018 |
| CR759826.1 | 0.059 | hnrnpa0l | -0.018 |
| hoxd11a | 0.057 | gng3 | -0.017 |
| usp21 | 0.056 | ckbb | -0.017 |
| si:dkey-88l16.2 | 0.054 | fam168a | -0.017 |
| hoxd12a | 0.053 | ywhabl | -0.017 |
| hoxc3a | 0.050 | COX3 | -0.017 |
| LOC110439999.1 | 0.050 | tubb5 | -0.016 |
| CU019646.1 | 0.050 | kdm6bb | -0.016 |
| hoxa11a | 0.049 | atp5f1b | -0.016 |
| si:ch211-62a1.3 | 0.048 | oaz1b | -0.016 |
| gig2g | 0.047 | zc4h2 | -0.016 |