Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.408 | gapdhs | -0.116 |
| hoxb7a | 0.367 | anxa1a | -0.109 |
| hoxd9a | 0.344 | capns1a | -0.107 |
| BX005254.3 | 0.344 | krt91 | -0.105 |
| cdx4 | 0.342 | rplp2 | -0.105 |
| LOC101882251 | 0.324 | eef1da | -0.103 |
| hoxa10b | 0.320 | col1a1b | -0.103 |
| hoxd10a | 0.319 | aqp3a | -0.101 |
| hoxd12a | 0.317 | krtt1c19e | -0.096 |
| hoxc8a | 0.305 | s100a10b | -0.095 |
| hoxd11a | 0.300 | col1a2 | -0.094 |
| hoxb9a | 0.294 | anxa2a | -0.094 |
| sp8b | 0.294 | cotl1 | -0.094 |
| hoxa9b | 0.285 | rbp4 | -0.090 |
| insl5a | 0.280 | postnb | -0.089 |
| hoxc6b | 0.275 | si:dkey-33c14.3 | -0.089 |
| hoxa11b | 0.268 | capgb | -0.088 |
| hoxc11b | 0.268 | col1a1a | -0.086 |
| apoc1 | 0.265 | sparc | -0.085 |
| crabp2a | 0.257 | col4a5 | -0.084 |
| sp5l | 0.254 | cxl34b.11 | -0.083 |
| vcana | 0.250 | col4a6 | -0.082 |
| emx2 | 0.248 | rps29 | -0.082 |
| hoxa9a | 0.248 | col14a1b | -0.080 |
| nkx1.2la | 0.247 | s100v1 | -0.080 |
| apela | 0.245 | pycard | -0.079 |
| mllt3 | 0.236 | epgn | -0.078 |
| hoxc3a | 0.234 | igfbp7 | -0.078 |
| tmeff1b | 0.230 | si:ch211-39i22.1 | -0.077 |
| her12 | 0.227 | ahcy | -0.075 |
| sp8a | 0.225 | ak1 | -0.073 |
| hoxd3a | 0.221 | zgc:136930 | -0.072 |
| nradd | 0.220 | itgb4 | -0.072 |
| BX001014.2 | 0.211 | s100v2 | -0.072 |
| rgs3a | 0.209 | pvalb1 | -0.071 |