| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb8a | 0.480 | aldob | -0.090 |
| hoxa9a | 0.474 | eef1da | -0.086 |
| hoxc9a | 0.451 | anxa1a | -0.083 |
| hoxc8a | 0.430 | epcam | -0.083 |
| hoxc3a | 0.420 | celf2 | -0.082 |
| hoxb10a | 0.415 | cfl1l | -0.082 |
| hoxb7a | 0.401 | icn | -0.079 |
| hoxd9a | 0.384 | pycard | -0.079 |
| hoxa9b | 0.380 | s100a10b | -0.079 |
| hoxa10b | 0.327 | krtt1c19e | -0.077 |
| hoxc6b | 0.317 | wu:fb18f06 | -0.077 |
| hoxa11b | 0.301 | krt5 | -0.076 |
| hoxc10a | 0.294 | anxa2a | -0.075 |
| hoxd10a | 0.283 | tmsb1 | -0.075 |
| hoxd3a | 0.282 | spint2 | -0.074 |
| hoxb1b | 0.272 | s100v1 | -0.073 |
| hoxd11a | 0.240 | cd9b | -0.072 |
| hoxd12a | 0.233 | si:ch211-105c13.3 | -0.072 |
| ldlrad2 | 0.232 | zgc:153284 | -0.072 |
| hoxc11a | 0.228 | cldnb | -0.071 |
| hoxb8b | 0.224 | mgst1.2 | -0.070 |
| hoxb3a | 0.218 | si:ch211-195b11.3 | -0.070 |
| vim | 0.217 | fbp1a | -0.069 |
| si:ch73-265d7.2 | 0.216 | krt17 | -0.069 |
| BX005254.3 | 0.209 | cyt1 | -0.068 |
| hoxa11a | 0.208 | s100v2 | -0.068 |
| BX001014.2 | 0.203 | si:dkey-16p21.8 | -0.068 |
| gfap | 0.203 | sod1 | -0.068 |
| hoxb6b | 0.202 | wu:fa03e10 | -0.068 |
| hoxa3a | 0.200 | krt4 | -0.067 |
| hoxc11b | 0.192 | pkp3a | -0.067 |
| slc1a3a | 0.187 | selenow2b | -0.067 |
| tmie | 0.184 | capgb | -0.066 |
| hoxc1a | 0.181 | krt91 | -0.066 |
| cdx4 | 0.179 | oclna | -0.066 |