| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb8a | 0.518 | fabp7a | -0.340 |
| hoxa9a | 0.484 | ptn | -0.252 |
| hoxc9a | 0.458 | ppap2d | -0.246 |
| hoxc8a | 0.427 | efhd1 | -0.239 |
| hoxc3a | 0.415 | atp1a1b | -0.238 |
| hoxb10a | 0.380 | itm2ba | -0.236 |
| myt1b | 0.364 | cd63 | -0.232 |
| si:ch73-386h18.1 | 0.356 | qki2 | -0.229 |
| hoxd9a | 0.352 | glula | -0.225 |
| lhx1a | 0.351 | si:ch211-66e2.5 | -0.222 |
| hoxb7a | 0.349 | nfia | -0.221 |
| hoxd3a | 0.345 | slc1a2b | -0.218 |
| hoxa9b | 0.338 | her6 | -0.216 |
| tmeff1b | 0.337 | slc1a3b | -0.215 |
| robo3 | 0.336 | cd82a | -0.209 |
| elavl3 | 0.334 | gpm6bb | -0.208 |
| scrt1a | 0.329 | jun | -0.204 |
| jagn1a | 0.321 | CU467822.1 | -0.202 |
| stxbp1a | 0.303 | id1 | -0.202 |
| zfhx3 | 0.303 | CR848047.1 | -0.199 |
| thsd7aa | 0.301 | klf6a | -0.196 |
| scrt2 | 0.301 | cspg5b | -0.193 |
| h3f3d | 0.299 | cxcl12a | -0.192 |
| hmgn6 | 0.296 | gpr37l1b | -0.192 |
| atcaya | 0.284 | si:dkey-7j14.6 | -0.192 |
| stx1b | 0.283 | fgfr2 | -0.192 |
| nhlh2 | 0.280 | cdo1 | -0.191 |
| lhx5 | 0.279 | gnai2a | -0.189 |
| hoxb3a | 0.279 | atp1b4 | -0.184 |
| cbfa2t3 | 0.277 | atp1b1a | -0.184 |
| pax2a | 0.277 | cx43 | -0.184 |
| rbfox3a | 0.276 | sox9a | -0.182 |
| zgc:100920 | 0.276 | podxl | -0.181 |
| zc4h2 | 0.275 | CR751602.2 | -0.181 |
| LOC100537384 | 0.274 | phox2bb | -0.180 |