| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc3a | 0.341 | celf2 | -0.106 |
| hoxb6b | 0.295 | pvalb1 | -0.092 |
| hoxb8a | 0.288 | ckbb | -0.091 |
| hoxc1a | 0.280 | eef1da | -0.088 |
| hoxb9a | 0.272 | pvalb2 | -0.087 |
| cdx4 | 0.255 | gapdhs | -0.078 |
| dhrs3b | 0.253 | hbae3 | -0.077 |
| hoxb3a | 0.252 | hbbe1.3 | -0.076 |
| hoxb7a | 0.252 | sod1 | -0.075 |
| hoxc8a | 0.251 | atp5if1b | -0.073 |
| hoxb5b | 0.239 | hbbe1.1 | -0.070 |
| hoxc6b | 0.234 | krtt1c19e | -0.069 |
| hoxb6a | 0.222 | hbae1.1 | -0.068 |
| CABZ01075068.1 | 0.207 | icn | -0.068 |
| si:ch73-265d7.2 | 0.204 | actc1b | -0.067 |
| hoxa3a | 0.203 | prdx2 | -0.067 |
| hoxb8b | 0.203 | cotl1 | -0.066 |
| hoxa9a | 0.202 | gpm6ab | -0.066 |
| BX001014.2 | 0.200 | krt91 | -0.066 |
| ldlrad2 | 0.194 | ahcy | -0.064 |
| nr6a1a | 0.194 | anxa1a | -0.064 |
| BX927258.1 | 0.192 | s100a10b | -0.064 |
| hoxc9a | 0.189 | rbp4 | -0.063 |
| hspb1 | 0.186 | hbbe2 | -0.062 |
| hoxb10a | 0.181 | rorb | -0.062 |
| apela | 0.180 | si:dkey-16p21.8 | -0.061 |
| hoxb5a | 0.178 | cap1 | -0.060 |
| slc1a3a | 0.173 | mdh2 | -0.060 |
| alcamb | 0.165 | s100v2 | -0.060 |
| gfap | 0.165 | si:dkey-33c14.3 | -0.060 |
| meis3 | 0.165 | gpm6aa | -0.059 |
| hoxa9b | 0.163 | ldhba | -0.059 |
| pkd1b | 0.160 | stmn1b | -0.058 |
| XLOC-001964 | 0.158 | apoa2 | -0.057 |
| BX005254.3 | 0.157 | krt4 | -0.057 |