| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| XLOC-042222 | 0.241 | pvalb1 | -0.108 |
| BX001014.2 | 0.234 | pvalb2 | -0.103 |
| BX005254.3 | 0.226 | fabp7a | -0.096 |
| BX927258.1 | 0.226 | ckbb | -0.094 |
| hoxc3a | 0.218 | gpm6aa | -0.093 |
| hoxb10a | 0.217 | tmsb | -0.085 |
| XLOC-001603 | 0.214 | stmn1b | -0.084 |
| hoxb7a | 0.206 | celf2 | -0.082 |
| XLOC-032526 | 0.199 | CU467822.1 | -0.080 |
| sall4 | 0.199 | tuba1c | -0.079 |
| optc | 0.193 | rtn1a | -0.078 |
| BX469925.3 | 0.185 | gapdhs | -0.075 |
| CABZ01075068.1 | 0.184 | CU634008.1 | -0.075 |
| XLOC-039121 | 0.183 | elavl3 | -0.074 |
| hoxd10a | 0.182 | gpm6ab | -0.072 |
| cdx4 | 0.179 | krtt1c19e | -0.071 |
| XLOC-042229 | 0.171 | eef1da | -0.068 |
| ldlrad2 | 0.167 | nova2 | -0.067 |
| tcf15 | 0.165 | sod1 | -0.066 |
| nid2a | 0.163 | actc1b | -0.065 |
| fkbp9 | 0.161 | cadm3 | -0.065 |
| apela | 0.160 | myt1b | -0.065 |
| lin28a | 0.160 | si:dkey-276j7.1 | -0.064 |
| nr2f5 | 0.159 | mdkb | -0.062 |
| hoxb1b | 0.158 | icn | -0.061 |
| hoxc6b | 0.157 | rbp4 | -0.061 |
| znfl1k | 0.155 | gng3 | -0.060 |
| col8a1a | 0.154 | tcnbb | -0.060 |
| oc90 | 0.154 | icn2 | -0.059 |
| tpm4a | 0.152 | mab21l1 | -0.059 |
| mllt3 | 0.151 | mylpfa | -0.059 |
| fbn2a.1 | 0.149 | ip6k2a | -0.058 |
| hoxb9a | 0.148 | ndrg2 | -0.058 |
| cnbpa | 0.147 | ahcy | -0.057 |
| hspb1 | 0.147 | krt91 | -0.057 |