| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb5b | 0.526 | aldob | -0.058 |
| hoxb6a | 0.396 | si:dkey-16p21.8 | -0.055 |
| hoxc4a | 0.331 | mgst1.2 | -0.045 |
| hoxb6b | 0.324 | stm | -0.045 |
| hoxc5a | 0.301 | wu:fa03e10 | -0.045 |
| hoxa5a | 0.285 | pnp5a | -0.043 |
| hoxc1a | 0.276 | si:ch211-152c2.3 | -0.042 |
| hoxb3a | 0.262 | wu:fb18f06 | -0.042 |
| hoxa3a | 0.210 | krt5 | -0.041 |
| hoxb8a | 0.197 | pou5f3 | -0.041 |
| hoxc3a | 0.192 | abcb5 | -0.040 |
| hoxd4a | 0.186 | dhrs13a.2 | -0.039 |
| hoxb1b | 0.178 | hrc | -0.039 |
| raraa | 0.144 | krt17 | -0.039 |
| hoxd3a | 0.141 | otx2a | -0.039 |
| meis1b | 0.135 | si:ch211-207n23.2 | -0.039 |
| mab21l2 | 0.123 | si:dkey-222n6.2 | -0.039 |
| dhrs3b | 0.122 | si:dkeyp-51b9.3 | -0.039 |
| meis2b | 0.122 | agr1 | -0.038 |
| hoxb8b | 0.119 | ahcy | -0.038 |
| hoxc6a | 0.119 | anxa1a | -0.038 |
| hoxb2a | 0.118 | krtt1c19e | -0.038 |
| CR751227.2 | 0.116 | s100a1 | -0.038 |
| meis3 | 0.115 | si:ch73-52f15.5 | -0.038 |
| elavl4 | 0.110 | DSG2 | -0.037 |
| syt2a | 0.110 | eef1da | -0.037 |
| tshz1 | 0.110 | en2b | -0.037 |
| tmeff1b | 0.106 | lye | -0.037 |
| phox2bb | 0.105 | otx1 | -0.037 |
| pik3r3b | 0.105 | otx2b | -0.037 |
| tmie | 0.103 | polr3gla | -0.037 |
| vim | 0.102 | pycard | -0.037 |
| phox2a | 0.099 | si:ch1073-80i24.3 | -0.037 |
| zfhx3 | 0.099 | si:ch211-125o16.4 | -0.037 |
| hoxb4a | 0.097 | zgc:193505 | -0.037 |