| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb5b | 0.431 | aldob | -0.101 |
| hoxc1a | 0.351 | eef1da | -0.095 |
| hoxb3a | 0.333 | si:dkey-16p21.8 | -0.087 |
| hoxb5a | 0.331 | hdlbpa | -0.085 |
| hoxd4a | 0.310 | epcam | -0.080 |
| hoxc5a | 0.273 | eif4ebp3l | -0.077 |
| hoxa5a | 0.270 | cfl1l | -0.074 |
| hoxa3a | 0.261 | f11r.1 | -0.073 |
| hoxb6b | 0.250 | si:ch211-152c2.3 | -0.073 |
| hoxd3a | 0.249 | cd9b | -0.072 |
| raraa | 0.220 | zgc:162730 | -0.069 |
| tmeff1b | 0.218 | atp1b1a | -0.068 |
| meis2b | 0.216 | ucp2 | -0.067 |
| si:ch73-386h18.1 | 0.215 | cast | -0.066 |
| meis1b | 0.214 | hspb1 | -0.066 |
| elavl3 | 0.213 | rsl1d1 | -0.066 |
| hoxb6a | 0.205 | spint2 | -0.066 |
| mab21l2 | 0.201 | ccng1 | -0.065 |
| myt1b | 0.193 | glo1 | -0.065 |
| hoxc3a | 0.188 | krt8 | -0.065 |
| nova2 | 0.185 | nop10 | -0.065 |
| pik3r3b | 0.181 | npm1a | -0.065 |
| meis3 | 0.180 | tuba8l2 | -0.065 |
| hoxb8a | 0.175 | anxa1a | -0.064 |
| tuba1c | 0.175 | gsta.1 | -0.064 |
| tmsb | 0.174 | gstp1 | -0.064 |
| hmgb3a | 0.170 | stm | -0.064 |
| tshz1 | 0.168 | wu:fb18f06 | -0.064 |
| gdf11 | 0.167 | cdh1 | -0.063 |
| syt2a | 0.167 | cebpd | -0.063 |
| rtn1a | 0.166 | fbl | -0.063 |
| si:ch211-57n23.4 | 0.166 | prr13 | -0.063 |
| vim | 0.165 | sult6b1 | -0.063 |
| fabp3 | 0.164 | ahnak | -0.062 |
| gng2 | 0.163 | apoeb | -0.062 |