| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb5b | 0.224 | rsl1d1 | -0.024 |
| hoxd4a | 0.212 | cdca7b | -0.022 |
| hoxb3a | 0.202 | nop2 | -0.021 |
| hoxb5a | 0.185 | shisa2a | -0.020 |
| hoxc1a | 0.183 | gar1 | -0.020 |
| hoxd3a | 0.157 | rrp1 | -0.019 |
| hoxa5a | 0.154 | rpa3 | -0.019 |
| hoxc5a | 0.135 | bms1 | -0.019 |
| hoxa3a | 0.133 | aldob | -0.019 |
| gbx1 | 0.115 | sfrp1a | -0.018 |
| phox2bb | 0.111 | mybbp1a | -0.018 |
| hoxc3a | 0.109 | fbl | -0.018 |
| mab21l2 | 0.104 | rrp9 | -0.018 |
| tmsb | 0.095 | six3b | -0.018 |
| hoxb6b | 0.093 | mrto4 | -0.018 |
| slc6a5 | 0.087 | cd3eap | -0.018 |
| nova1 | 0.086 | dkc1 | -0.017 |
| elavl4 | 0.084 | hells | -0.017 |
| st8sia2 | 0.082 | ebna1bp2 | -0.017 |
| elavl3 | 0.080 | gnl3 | -0.017 |
| hoxb6a | 0.080 | fzd5 | -0.017 |
| si:ch73-386h18.1 | 0.079 | nop58 | -0.017 |
| mtus2a | 0.078 | cad | -0.017 |
| crabp1b | 0.077 | zgc:101858 | -0.017 |
| pik3r3b | 0.077 | tsr1 | -0.017 |
| CR382326.1 | 0.076 | glrx5 | -0.017 |
| BX957228.1 | 0.074 | si:dkey-102m7.3 | -0.017 |
| pax2b | 0.074 | dnttip2 | -0.017 |
| hoxb2a | 0.073 | mcm2 | -0.017 |
| meis1b | 0.072 | hspb1 | -0.017 |
| hoxb8a | 0.071 | pprc1 | -0.017 |
| tshz3b | 0.069 | NC-002333.4 | -0.016 |
| meis3 | 0.069 | ccnd1 | -0.016 |
| nkx1.2lb | 0.068 | npm1a | -0.016 |
| tlx2 | 0.068 | mcm6 | -0.016 |