| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb5b | 0.346 | aldob | -0.041 |
| hoxb5a | 0.285 | eef1da | -0.038 |
| hoxc4a | 0.270 | si:dkey-16p21.8 | -0.038 |
| hoxc5a | 0.205 | epcam | -0.034 |
| hoxc1a | 0.199 | cfl1l | -0.033 |
| hoxb6b | 0.193 | hdlbpa | -0.033 |
| hoxb6a | 0.173 | anxa1a | -0.029 |
| hoxb3a | 0.154 | cd9b | -0.029 |
| hoxa3a | 0.146 | f11r.1 | -0.029 |
| hoxd4a | 0.139 | s100a10b | -0.029 |
| raraa | 0.101 | krt5 | -0.028 |
| meis1b | 0.095 | pfn1 | -0.028 |
| hoxd3a | 0.094 | prr13 | -0.028 |
| tmeff1b | 0.093 | si:ch211-152c2.3 | -0.028 |
| hoxc3a | 0.092 | spint2 | -0.028 |
| meis2b | 0.091 | tuba8l2 | -0.028 |
| hoxb1b | 0.090 | cast | -0.027 |
| elavl3 | 0.089 | eif4ebp3l | -0.027 |
| meis3 | 0.086 | mgst1.2 | -0.027 |
| phox2bb | 0.085 | pycard | -0.027 |
| gng2 | 0.084 | wu:fb18f06 | -0.027 |
| si:ch73-386h18.1 | 0.084 | gstp1 | -0.026 |
| phox2a | 0.083 | icn | -0.026 |
| vim | 0.083 | oclna | -0.026 |
| myt1b | 0.081 | pnp5a | -0.026 |
| mab21l2 | 0.080 | s100v2 | -0.026 |
| elavl4 | 0.077 | spint1a | -0.026 |
| gap43 | 0.076 | ucp2 | -0.026 |
| tmie | 0.076 | zgc:162730 | -0.026 |
| hoxb2a | 0.075 | anxa2a | -0.025 |
| hoxb8a | 0.075 | cdh1 | -0.025 |
| tshz1 | 0.075 | ckap4 | -0.025 |
| syt2a | 0.074 | cldnb | -0.025 |
| zfhx3 | 0.074 | cyt1 | -0.025 |
| atcaya | 0.073 | fbp1a | -0.025 |