| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb3a | 0.211 | aldob | -0.096 |
| meis1b | 0.172 | eef1da | -0.079 |
| hoxc4a | 0.168 | cfl1l | -0.076 |
| pbx3b | 0.166 | si:dkey-16p21.8 | -0.075 |
| elavl3 | 0.163 | epcam | -0.073 |
| nova2 | 0.160 | hdlbpa | -0.072 |
| hoxc1a | 0.158 | wu:fb18f06 | -0.072 |
| hoxd3a | 0.155 | mgst1.2 | -0.069 |
| tuba1c | 0.155 | tuba8l2 | -0.068 |
| tmeff1b | 0.153 | si:ch211-152c2.3 | -0.067 |
| meis2b | 0.153 | cd9b | -0.066 |
| hmgb3a | 0.152 | lye | -0.066 |
| zc4h2 | 0.143 | pycard | -0.066 |
| hoxb5b | 0.142 | spint2 | -0.066 |
| stmn1b | 0.142 | anxa1a | -0.065 |
| hoxa3a | 0.141 | cast | -0.065 |
| fam168a | 0.140 | zgc:153284 | -0.065 |
| gng3 | 0.140 | pnp5a | -0.064 |
| hoxb8a | 0.140 | cst14b.1 | -0.063 |
| rtn1a | 0.140 | hrc | -0.063 |
| si:ch73-386h18.1 | 0.140 | icn | -0.063 |
| hoxd4a | 0.138 | krt5 | -0.063 |
| meis2a | 0.136 | ppl | -0.063 |
| mab21l2 | 0.135 | s100a10b | -0.063 |
| rbfox1 | 0.132 | agr1 | -0.062 |
| fabp3 | 0.130 | cldne | -0.062 |
| stxbp1a | 0.129 | polr3gla | -0.062 |
| pik3r3b | 0.128 | pou5f3 | -0.062 |
| stx1b | 0.128 | prr13 | -0.062 |
| tubb5 | 0.128 | zgc:175088 | -0.062 |
| tshz3b | 0.127 | zgc:193505 | -0.062 |
| marcksl1a | 0.126 | anxa1c | -0.061 |
| rtn1b | 0.125 | anxa2a | -0.061 |
| hoxb6b | 0.124 | capns1a | -0.061 |
| si:dkey-276j7.1 | 0.124 | f11r.1 | -0.061 |