| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb5b | 0.326 | rgs2 | -0.076 |
| hoxb6a | 0.298 | lamb1b | -0.070 |
| hoxc1a | 0.191 | hoxd9a | -0.069 |
| hoxc3a | 0.163 | ucp2 | -0.068 |
| hoxc5a | 0.162 | hoxa10b | -0.065 |
| sync | 0.157 | hoxa11b | -0.064 |
| barx1 | 0.156 | hoxc10a | -0.064 |
| hoxc6a | 0.153 | rasl12 | -0.064 |
| inhbab | 0.149 | rplp2 | -0.063 |
| ldha | 0.147 | rbp4 | -0.062 |
| pitx1 | 0.145 | hoxa11a | -0.062 |
| emilin2a | 0.143 | dub | -0.061 |
| angptl5 | 0.142 | hoxc6b | -0.061 |
| hoxb6b | 0.140 | hoxa9a | -0.060 |
| dtnbp1b | 0.140 | tmsb4x | -0.059 |
| nkx3.3 | 0.138 | hoxb9a | -0.059 |
| pgk1 | 0.134 | fgfr4 | -0.058 |
| sfrp1a | 0.130 | ephb3 | -0.056 |
| hsd11b2 | 0.127 | lbh | -0.056 |
| gapdhs | 0.126 | slc6a4a | -0.056 |
| pkma | 0.126 | tbx18 | -0.056 |
| scpp9 | 0.125 | cfd | -0.055 |
| si:ch211-105c13.3 | 0.123 | si:ch211-137i24.10 | -0.055 |
| eno3 | 0.121 | hoxa13b | -0.055 |
| wnt11r | 0.121 | fhl1b | -0.055 |
| namptb | 0.120 | mmel1 | -0.055 |
| foxq1a | 0.117 | pcdh18a | -0.054 |
| slc1a9 | 0.117 | hoxa13a | -0.054 |
| aldocb | 0.115 | sh3d21 | -0.054 |
| meis2b | 0.115 | pabpc4 | -0.054 |
| slc38a5a | 0.113 | hey2 | -0.054 |
| tac3b | 0.111 | hoxd10a | -0.054 |
| CU928046.1 | 0.111 | hoxc11a | -0.053 |
| hoxb3a | 0.109 | hoxd12a | -0.053 |
| calm3b | 0.109 | hoxc9a | -0.052 |