| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb5b | 0.654 | hmgb2a | -0.082 |
| hoxb6a | 0.499 | anp32b | -0.074 |
| hoxb6b | 0.441 | hmgb2b | -0.073 |
| hoxc4a | 0.412 | pcna | -0.073 |
| hoxc5a | 0.401 | id1 | -0.070 |
| hoxa5a | 0.379 | si:ch73-281n10.2 | -0.069 |
| hoxc1a | 0.354 | sox19a | -0.069 |
| hoxc3a | 0.274 | nop58 | -0.068 |
| hoxa3a | 0.267 | snu13b | -0.068 |
| hoxb3a | 0.258 | npm1a | -0.068 |
| hoxb8a | 0.247 | aldob | -0.067 |
| hoxd4a | 0.212 | ranbp1 | -0.066 |
| raraa | 0.191 | nop56 | -0.065 |
| hoxb1b | 0.188 | dkc1 | -0.065 |
| hoxc6a | 0.178 | ccnd1 | -0.064 |
| hoxd3a | 0.173 | nop10 | -0.064 |
| hoxb8b | 0.167 | fbl | -0.064 |
| mab21l2 | 0.156 | banf1 | -0.063 |
| dhrs3b | 0.146 | eef1a1l1 | -0.062 |
| pik3r3b | 0.132 | lig1 | -0.062 |
| meis1b | 0.127 | snrpb | -0.062 |
| BX936342.2 | 0.124 | en2b | -0.061 |
| elavl4 | 0.118 | nhp2 | -0.059 |
| zfhx3 | 0.118 | rsl1d1 | -0.059 |
| vim | 0.116 | chaf1a | -0.059 |
| tshz2 | 0.116 | mcm6 | -0.059 |
| CR751227.2 | 0.113 | tuba8l4 | -0.058 |
| tmie | 0.113 | rpa3 | -0.057 |
| meis2b | 0.113 | nutf2l | -0.057 |
| zfhx4 | 0.112 | hnrnpabb | -0.056 |
| phox2bb | 0.112 | rrm1 | -0.056 |
| znf513a | 0.112 | nop2 | -0.056 |
| syt2a | 0.111 | sox3 | -0.055 |
| hoxb2a | 0.111 | gar1 | -0.055 |
| si:ch73-386h18.1 | 0.107 | ebna1bp2 | -0.055 |