| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc3a | 0.368 | fabp7a | -0.239 |
| hoxb3a | 0.327 | ckbb | -0.239 |
| hoxc1a | 0.324 | slc1a2b | -0.209 |
| dhrs3b | 0.317 | CU467822.1 | -0.208 |
| hoxb6b | 0.299 | efhd1 | -0.187 |
| hoxb8a | 0.295 | CR848047.1 | -0.185 |
| CABZ01075068.1 | 0.285 | ppap2d | -0.185 |
| hoxa3a | 0.264 | nfia | -0.173 |
| slc1a3a | 0.253 | celf2 | -0.172 |
| hoxb9a | 0.241 | glula | -0.170 |
| hoxc8a | 0.236 | ptn | -0.170 |
| hoxb5b | 0.228 | pvalb1 | -0.161 |
| hoxb6a | 0.225 | itm2ba | -0.159 |
| hoxb7a | 0.222 | slc1a3b | -0.159 |
| BX001014.2 | 0.208 | atp1a1b | -0.158 |
| meis1a | 0.208 | acbd7 | -0.154 |
| hmga1a | 0.206 | pvalb2 | -0.152 |
| si:ch211-222l21.1 | 0.205 | slc6a1b | -0.151 |
| cdx4 | 0.205 | CR751602.2 | -0.148 |
| hoxb8b | 0.201 | cotl1 | -0.147 |
| hoxc6b | 0.198 | gpm6aa | -0.147 |
| greb1l | 0.197 | cspg5b | -0.147 |
| wnt11r | 0.196 | si:ch211-66e2.5 | -0.145 |
| raraa | 0.194 | qki2 | -0.144 |
| cx43.4 | 0.193 | cdo1 | -0.144 |
| znf503 | 0.192 | cyp26b1 | -0.143 |
| meis1b | 0.192 | cxcl12a | -0.143 |
| gfap | 0.192 | gpm6bb | -0.141 |
| ldlrad2 | 0.191 | LOC103909284 | -0.139 |
| lin28a | 0.189 | si:dkey-204f11.64 | -0.137 |
| si:ch73-265d7.2 | 0.188 | ca4a | -0.135 |
| oc90 | 0.187 | efnb1 | -0.135 |
| trim71 | 0.185 | cspg5a | -0.135 |
| nr6a1a | 0.184 | gapdhs | -0.134 |
| nr2f6b | 0.184 | slc38a3a | -0.133 |