Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdx4 | 0.231 | fabp7a | -0.114 |
| hoxb10a | 0.197 | ckbb | -0.086 |
| BX005254.3 | 0.192 | CU467822.1 | -0.080 |
| apela | 0.189 | atp1a1b | -0.079 |
| chrd | 0.184 | slc1a2b | -0.078 |
| hoxa10b | 0.182 | zgc:165461 | -0.074 |
| hoxd10a | 0.181 | CR383676.1 | -0.074 |
| hspb1 | 0.166 | gpm6aa | -0.071 |
| sp5l | 0.165 | gpm6bb | -0.071 |
| nradd | 0.164 | ptn | -0.070 |
| hoxd9a | 0.153 | gapdhs | -0.069 |
| hoxa11b | 0.149 | pvalb1 | -0.069 |
| BX001014.2 | 0.148 | pvalb2 | -0.066 |
| hoxd12a | 0.147 | efhd1 | -0.065 |
| fgf8a | 0.145 | atp1b4 | -0.065 |
| cxcr4a | 0.144 | tmsb4x | -0.065 |
| asb11 | 0.144 | ppap2d | -0.064 |
| znfl2a | 0.142 | CR848047.1 | -0.063 |
| sall4 | 0.141 | glula | -0.061 |
| cx43.4 | 0.141 | nfia | -0.060 |
| XLOC-042222 | 0.135 | qki2 | -0.060 |
| nkx1.2la | 0.135 | slc1a3b | -0.059 |
| hoxa9b | 0.133 | celf2 | -0.058 |
| noto | 0.132 | cspg5a | -0.058 |
| mllt3 | 0.130 | si:ch211-66e2.5 | -0.058 |
| BX927258.1 | 0.129 | marcksl1a | -0.058 |
| pou5f3 | 0.129 | cotl1 | -0.057 |
| hoxb7a | 0.123 | fgfr2 | -0.055 |
| hoxa9a | 0.123 | klf6a | -0.055 |
| XLOC-001964 | 0.121 | actc1b | -0.054 |
| foxd5 | 0.118 | gpr37l1b | -0.054 |
| arid3b | 0.117 | marcksl1b | -0.054 |
| hoxa11a | 0.117 | cxcl12a | -0.052 |
| hoxd11a | 0.117 | cx43 | -0.052 |
| ldlrad2 | 0.113 | acbd7 | -0.052 |