Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxd10a | 0.394 | marcksl1b | -0.068 |
| hoxb10a | 0.346 | FQ323156.1 | -0.064 |
| hoxd9a | 0.324 | si:ch73-23l24.1 | -0.062 |
| hoxd11a | 0.316 | zgc:113232 | -0.059 |
| BX005254.3 | 0.279 | col9a1b | -0.056 |
| sall4 | 0.277 | krt8 | -0.055 |
| hoxa11b | 0.277 | eif3jb | -0.053 |
| fgf20a | 0.272 | s100a1 | -0.052 |
| gdf11 | 0.271 | col2a1a | -0.052 |
| sst6 | 0.261 | cfl1l | -0.052 |
| fgf4 | 0.256 | zmp:0000000760 | -0.052 |
| cdaa | 0.253 | col11a2 | -0.051 |
| si:ch211-129o18.4 | 0.253 | cmn | -0.051 |
| hoxa10b | 0.252 | tbx16 | -0.050 |
| pcp4a | 0.247 | stm | -0.050 |
| htr5aa | 0.246 | epyc | -0.050 |
| parvb | 0.244 | ucmab | -0.050 |
| CABZ01030107.1 | 0.242 | col9a2 | -0.048 |
| hoxb7a | 0.239 | NC-002333.4 | -0.048 |
| spata4 | 0.238 | cpn1 | -0.048 |
| hoxd12a | 0.235 | pitx2 | -0.048 |
| fzd10 | 0.232 | krt18a.1 | -0.047 |
| alpi.1 | 0.230 | si:ch211-243g18.2 | -0.047 |
| slc39a4 | 0.228 | cst3 | -0.047 |
| her12 | 0.228 | metap2b | -0.047 |
| aplnr2 | 0.223 | si:dkey-6n6.1 | -0.047 |
| aebp1 | 0.222 | shisa2a | -0.046 |
| hoxc11b | 0.219 | fscn1a | -0.046 |
| tagln3b | 0.215 | chrd | -0.046 |
| fgf8a | 0.211 | matn3a | -0.046 |
| hoxc3a | 0.210 | slc7a8a | -0.046 |
| raraa | 0.207 | epcam | -0.045 |
| BX001014.2 | 0.207 | sec13 | -0.045 |
| hoxd13a | 0.207 | bambia | -0.045 |
| FP245458.1 | 0.207 | meis1b | -0.045 |