| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.459 | actc1b | -0.259 |
| hnrnpa0l | 0.420 | ckma | -0.248 |
| h3f3a | 0.407 | ckmb | -0.248 |
| hoxd10a | 0.405 | atp2a1 | -0.244 |
| her12 | 0.375 | gapdh | -0.241 |
| her1 | 0.373 | ak1 | -0.234 |
| zgc:56493 | 0.359 | pabpc4 | -0.233 |
| ewsr1b | 0.350 | aldoab | -0.227 |
| ephb3 | 0.346 | tmem38a | -0.224 |
| dut | 0.345 | tnnc2 | -0.224 |
| fn1b | 0.343 | mylpfa | -0.223 |
| hoxd12a | 0.343 | neb | -0.221 |
| itm2cb | 0.341 | si:dkey-16p21.8 | -0.218 |
| tspan7 | 0.337 | si:ch73-367p23.2 | -0.217 |
| si:ch1073-429i10.3.1 | 0.335 | pvalb1 | -0.214 |
| XLOC-042222 | 0.327 | mylz3 | -0.212 |
| fbln1 | 0.324 | pvalb2 | -0.212 |
| zbtb16a | 0.314 | eno1a | -0.212 |
| pcdh8 | 0.312 | ldb3b | -0.212 |
| hsp90ab1 | 0.312 | acta1b | -0.210 |
| greb1 | 0.312 | tnnt3a | -0.209 |
| XLOC-001964 | 0.310 | nme2b.2 | -0.209 |
| ran | 0.308 | ank1a | -0.206 |
| ubc | 0.305 | cav3 | -0.206 |
| nid2a | 0.302 | myl1 | -0.205 |
| hoxa11b | 0.302 | actn3a | -0.205 |
| BX005254.3 | 0.301 | tpma | -0.205 |
| cct2 | 0.297 | CABZ01078594.1 | -0.204 |
| nfyba | 0.297 | myom1a | -0.203 |
| hoxa11a | 0.297 | ttn.2 | -0.202 |
| hoxa10b | 0.296 | srl | -0.202 |
| COX7A2 (1 of many) | 0.294 | tnnt3b | -0.201 |
| sinhcafl | 0.293 | hhatla | -0.200 |
| eif3ba | 0.293 | pgam2 | -0.200 |
| si:dkey-261h17.1 | 0.291 | smyd1a | -0.200 |