| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxa11b | 0.202 | celf2 | -0.027 |
| hoxc11b | 0.201 | si:ch211-222l21.1 | -0.025 |
| hoxd11a | 0.191 | hnrnpa0b | -0.024 |
| hoxd12a | 0.189 | khdrbs1a | -0.024 |
| hoxc10a | 0.185 | setb | -0.021 |
| hoxc12a | 0.164 | h2afvb | -0.020 |
| hoxd10a | 0.160 | efnb3b | -0.020 |
| hoxa11a | 0.159 | hnrnpabb | -0.019 |
| hoxd9a | 0.148 | ddx39ab | -0.019 |
| hoxa10b | 0.141 | top1l | -0.019 |
| hoxb10a | 0.125 | si:ch211-137a8.4 | -0.018 |
| hoxb9a | 0.117 | ptmab | -0.018 |
| hoxc12b | 0.115 | mdkb | -0.018 |
| hoxa9b | 0.105 | snrpb | -0.017 |
| hoxa9a | 0.090 | mex3b | -0.017 |
| hoxc13a | 0.079 | smarca4a | -0.017 |
| BX005254.2 | 0.072 | hdac1 | -0.017 |
| hoxc9a | 0.065 | si:ch211-288g17.3 | -0.017 |
| LOC108190371 | 0.064 | seta | -0.017 |
| hoxa13b | 0.056 | hnrnpaba | -0.017 |
| si:dkey-47k20.8 | 0.053 | pfn2l | -0.017 |
| hoxb7a | 0.053 | actb2 | -0.017 |
| CU179656.2 | 0.052 | hspa8 | -0.016 |
| BX005254.3 | 0.050 | srsf3b | -0.016 |
| XLOC-039765 | 0.050 | ran | -0.016 |
| hoxd13a | 0.049 | psmb7 | -0.016 |
| si:ch73-380l10.2 | 0.047 | ncl | -0.016 |
| CCKAR | 0.045 | mbd3b | -0.016 |
| si:dkey-88j15.3 | 0.045 | hmgn7 | -0.016 |
| CU179656.1 | 0.044 | sumo3a | -0.016 |
| pcolcea | 0.043 | ilf3b | -0.016 |
| hoxc6b | 0.043 | map2k6 | -0.016 |
| isl2b | 0.043 | snrpe | -0.016 |
| hoxc3a | 0.041 | rbbp4 | -0.016 |
| hoxd3a | 0.041 | ptprn2 | -0.016 |