| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc11b | 0.333 | col9a1a | -0.070 |
| hoxa11a | 0.297 | foxc1b | -0.068 |
| hoxc10a | 0.270 | col2a1a | -0.068 |
| hoxa11b | 0.244 | col9a2 | -0.063 |
| hoxd11a | 0.241 | col9a3 | -0.059 |
| hoxd12a | 0.235 | rarga | -0.058 |
| emilin2b | 0.235 | ecrg4a | -0.058 |
| hoxd10a | 0.226 | fgfbp2b | -0.058 |
| hoxd9a | 0.214 | cnmd | -0.054 |
| hoxb9a | 0.207 | dlx5a | -0.053 |
| kazald2 | 0.204 | sox9a | -0.053 |
| hoxa10b | 0.196 | barx1 | -0.051 |
| postnb | 0.182 | six1a | -0.051 |
| hoxc12a | 0.180 | col11a2 | -0.050 |
| zmp:0000000846 | 0.175 | gsc | -0.050 |
| hoxb10a | 0.173 | cldn11a | -0.047 |
| hoxc12b | 0.171 | fxyd1 | -0.046 |
| clec19a | 0.170 | LOC101883507 | -0.046 |
| c1qtnf12 | 0.168 | prdx2 | -0.044 |
| apela | 0.165 | col11a1a | -0.044 |
| evx1 | 0.162 | fibina | -0.043 |
| aplnr2 | 0.159 | sema3bl | -0.043 |
| hoxa9b | 0.147 | tgfb2 | -0.043 |
| hoxa9a | 0.146 | six2a | -0.043 |
| ca6 | 0.142 | dlx2a | -0.043 |
| si:dkey-202e22.2 | 0.138 | tgfb3 | -0.043 |
| col5a2a | 0.138 | nfia | -0.043 |
| nanos3 | 0.137 | adgrl2a | -0.043 |
| cfd | 0.132 | col8a2 | -0.042 |
| ccl25b | 0.131 | hpgd | -0.042 |
| tnn | 0.129 | dlx1a | -0.042 |
| ankrd1b | 0.128 | ucmab | -0.041 |
| capn12 | 0.126 | junba | -0.040 |
| crabp2a | 0.124 | VIT | -0.040 |
| arl4ca | 0.124 | LO018188.1 | -0.040 |