| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.305 | hbae1.1 | -0.055 |
| hoxa10b | 0.295 | hbae3 | -0.053 |
| BX005254.3 | 0.266 | hbbe1.3 | -0.052 |
| hoxa11b | 0.252 | blvrb | -0.051 |
| hoxd10a | 0.244 | hbae1.3 | -0.050 |
| mnx1 | 0.238 | hbbe2 | -0.049 |
| hoxd9a | 0.236 | tspo | -0.049 |
| hoxa11a | 0.225 | alas2 | -0.048 |
| hoxb9a | 0.215 | cahz | -0.048 |
| tbxtb | 0.214 | hbbe1.2 | -0.047 |
| hoxc11a | 0.210 | prdx2 | -0.047 |
| hoxa9a | 0.208 | hbbe1.1 | -0.047 |
| hoxc3a | 0.203 | slc4a1a | -0.046 |
| hoxd11a | 0.202 | zgc:163057 | -0.046 |
| hoxb7a | 0.200 | hemgn | -0.044 |
| fbln1 | 0.187 | epb41b | -0.042 |
| hoxc9a | 0.180 | tmem14ca | -0.040 |
| her1 | 0.180 | rfesd | -0.040 |
| BX005254.2 | 0.179 | gpx1a | -0.040 |
| hoxd12a | 0.172 | nt5c2l1 | -0.039 |
| vox | 0.167 | hdr | -0.038 |
| hoxa9b | 0.167 | klf1 | -0.038 |
| dre-let-7b | 0.164 | nmt1b | -0.038 |
| wnt2bb | 0.164 | fth1a | -0.037 |
| apela | 0.161 | plac8l1 | -0.036 |
| LOC101885705 | 0.160 | si:ch211-207c6.2 | -0.035 |
| fgf10b | 0.155 | creg1 | -0.035 |
| pax2a | 0.154 | si:ch211-227m13.1 | -0.034 |
| hoxc11b | 0.153 | si:ch73-248e21.7 | -0.033 |
| sall4 | 0.153 | hmbsb | -0.033 |
| isl2a | 0.152 | hbbe3 | -0.033 |
| lin28a | 0.152 | tmod4 | -0.033 |
| her7 | 0.149 | laptm5 | -0.032 |
| lsp1 | 0.147 | tfr1a | -0.032 |
| vcana | 0.144 | si:ch211-250g4.3 | -0.032 |