| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxd9a | 0.235 | rbpms2b | -0.093 |
| hoxa11b | 0.235 | crip1 | -0.075 |
| hoxa10b | 0.214 | zeb2a | -0.073 |
| hoxd10a | 0.196 | c1qtnf6a | -0.071 |
| hoxc11a | 0.188 | gstm.3 | -0.070 |
| itgbl1 | 0.179 | junba | -0.070 |
| hlx1 | 0.162 | notch3 | -0.070 |
| rprm3 | 0.154 | si:dkey-57k2.6 | -0.068 |
| hoxa9b | 0.152 | ednraa | -0.067 |
| hoxa9a | 0.152 | barx1 | -0.067 |
| CR628365.1 | 0.141 | hsd11b2 | -0.067 |
| FO681390.1 | 0.140 | alcama | -0.066 |
| hoxa11a | 0.139 | fbln5 | -0.065 |
| shisal1b | 0.136 | hoxb5a | -0.064 |
| hoxd11a | 0.134 | rasl12 | -0.063 |
| fstl1a | 0.133 | si:dkey-238c7.16 | -0.063 |
| BX005254.3 | 0.127 | socs3a | -0.062 |
| nanos3 | 0.125 | enpp1 | -0.062 |
| si:dkey-9i23.4 | 0.124 | cyp1c1 | -0.062 |
| hoxd12a | 0.124 | higd1a | -0.061 |
| LOC100331480 | 0.124 | si:ch73-335l21.4 | -0.060 |
| LOC564237 | 0.122 | pdgfrb | -0.060 |
| hoxb10a | 0.121 | LO018188.1 | -0.059 |
| hhip | 0.117 | mcamb | -0.059 |
| bhmt | 0.114 | flrt3 | -0.057 |
| hoxc9a | 0.112 | gata5 | -0.057 |
| BX936433.1 | 0.112 | ldha | -0.057 |
| si:ch73-329n5.6 | 0.110 | hs3st3b1b | -0.057 |
| postnb | 0.110 | tpi1b | -0.056 |
| ntn5 | 0.109 | s100a10b | -0.056 |
| LOC108179300 | 0.109 | col4a1 | -0.056 |
| sctr | 0.108 | foxc1b | -0.056 |
| evx1 | 0.108 | wu:fj16a03 | -0.056 |
| foxq1b | 0.107 | atp1a1b | -0.054 |
| CR388148.2 | 0.106 | si:ch211-105c13.3 | -0.054 |