| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc11a | 0.270 | col9a1a | -0.068 |
| hoxb9a | 0.230 | col2a1a | -0.065 |
| hoxa11a | 0.214 | rarga | -0.062 |
| hoxa11b | 0.210 | foxc1b | -0.061 |
| hoxd9a | 0.203 | col9a2 | -0.059 |
| hoxa10b | 0.197 | fgfbp2b | -0.055 |
| hoxb10a | 0.191 | ecrg4a | -0.054 |
| hoxc11b | 0.191 | dlx5a | -0.054 |
| emilin2b | 0.178 | barx1 | -0.052 |
| hoxa9a | 0.178 | six1a | -0.052 |
| hoxd10a | 0.176 | gsc | -0.049 |
| postnb | 0.175 | col11a2 | -0.048 |
| hoxd11a | 0.173 | col9a3 | -0.048 |
| hoxc9a | 0.165 | sox9a | -0.048 |
| hoxa9b | 0.165 | six2a | -0.047 |
| hoxd12a | 0.153 | hpgd | -0.045 |
| aplnr2 | 0.153 | cnmd | -0.045 |
| hoxc6b | 0.143 | cldn11a | -0.044 |
| hoxc12b | 0.140 | dlx3b | -0.044 |
| col5a2a | 0.139 | dlx2a | -0.044 |
| hoxc12a | 0.137 | prdx2 | -0.043 |
| CABZ01039096.1 | 0.135 | fxyd1 | -0.042 |
| zmp:0000000846 | 0.135 | VIT | -0.041 |
| tnn | 0.132 | dlx4a | -0.041 |
| col1a1b | 0.131 | angptl1a | -0.041 |
| c1qtnf12 | 0.131 | KCTD15 | -0.041 |
| kazald2 | 0.130 | fibina | -0.040 |
| apela | 0.124 | col8a2 | -0.040 |
| tuba8l2 | 0.122 | ucmab | -0.039 |
| cfd | 0.118 | ifitm1 | -0.039 |
| clec19a | 0.118 | lsm6 | -0.039 |
| angptl2a | 0.117 | phlda3 | -0.039 |
| zgc:154093 | 0.110 | nfia | -0.039 |
| arid3c | 0.110 | dlx1a | -0.039 |
| hoxc3a | 0.108 | adgrl2a | -0.039 |