| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxd10a | 0.350 | ttn.2 | -0.168 |
| hoxd12a | 0.342 | ttn.1 | -0.163 |
| hoxa11b | 0.328 | actc1b | -0.154 |
| hoxb10a | 0.317 | klhl41b | -0.148 |
| hoxc11a | 0.314 | tmem38a | -0.144 |
| hoxa10b | 0.296 | fxr2 | -0.143 |
| hoxa11a | 0.290 | aldoab | -0.142 |
| hoxd9a | 0.272 | desma | -0.140 |
| hoxd11a | 0.267 | ak1 | -0.139 |
| itm2cb | 0.264 | atp2a1 | -0.138 |
| hoxc11b | 0.263 | pabpc4 | -0.137 |
| her1 | 0.262 | gapdh | -0.136 |
| fbln1 | 0.242 | tnni2b.1 | -0.135 |
| hoxd3a | 0.238 | srl | -0.135 |
| her12 | 0.237 | tnnc2 | -0.134 |
| rarga | 0.233 | ldb3a | -0.134 |
| hoxa13b | 0.227 | ckma | -0.133 |
| her7 | 0.218 | ckmb | -0.133 |
| BX005254.3 | 0.218 | mybphb | -0.133 |
| ephb3 | 0.218 | zgc:101853 | -0.133 |
| sall4 | 0.215 | acta1a | -0.132 |
| hoxc9a | 0.212 | acta1b | -0.130 |
| zgc:162939 | 0.204 | cav3 | -0.130 |
| gdf11 | 0.203 | txlnbb | -0.129 |
| hes6 | 0.202 | cox17 | -0.129 |
| hoxc12b | 0.202 | eno1a | -0.129 |
| pcdh8 | 0.196 | myl1 | -0.128 |
| hoxa9b | 0.192 | tpma | -0.128 |
| greb1 | 0.192 | neb | -0.126 |
| hoxb7a | 0.191 | nme2b.2 | -0.126 |
| zbtb16a | 0.191 | gatm | -0.125 |
| phgdh | 0.185 | rbfox1l | -0.125 |
| hoxc13b | 0.185 | mylpfa | -0.123 |
| XLOC-042222 | 0.183 | nexn | -0.123 |
| hoxc13a | 0.180 | CABZ01072309.1 | -0.122 |