| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.460 | marcksl1b | -0.109 |
| hoxd10a | 0.431 | FQ323156.1 | -0.099 |
| hoxd9a | 0.426 | stm | -0.096 |
| gdf11 | 0.415 | aldob | -0.095 |
| BX005254.3 | 0.405 | si:ch211-152c2.3 | -0.089 |
| hoxa9b | 0.387 | krt8 | -0.087 |
| hoxa10b | 0.384 | si:ch211-243g18.2 | -0.086 |
| hoxb9a | 0.365 | cst3 | -0.084 |
| hoxd12a | 0.356 | tbx16 | -0.080 |
| hoxd11a | 0.354 | s100a1 | -0.079 |
| fgf20a | 0.352 | shisa2a | -0.079 |
| hoxb7a | 0.350 | chrd | -0.079 |
| BX001014.2 | 0.346 | si:ch73-160h15.3 | -0.077 |
| hoxa11b | 0.346 | insb | -0.076 |
| her12 | 0.344 | ddx4 | -0.075 |
| hoxc3a | 0.328 | si:dkey-66i24.9 | -0.074 |
| si:ch211-129o18.4 | 0.325 | krt18a.1 | -0.074 |
| cdaa | 0.325 | pitx2 | -0.074 |
| fzd10 | 0.311 | fscn1a | -0.073 |
| alpi.1 | 0.311 | pou5f3 | -0.073 |
| fgf4 | 0.310 | add3b | -0.072 |
| sall4 | 0.308 | nnr | -0.072 |
| hoxc6b | 0.291 | si:ch73-23l24.1 | -0.072 |
| myclb | 0.288 | h1m | -0.071 |
| her15.1 | 0.287 | epcam | -0.071 |
| hoxa11a | 0.285 | csrp1a | -0.071 |
| XLOC-042222 | 0.283 | zgc:113232 | -0.070 |
| hoxc11a | 0.279 | spint2 | -0.070 |
| hoxd3a | 0.271 | akap12b | -0.069 |
| fgf8a | 0.268 | zgc:92818 | -0.069 |
| her4.1 | 0.267 | acin1b | -0.069 |
| sst6 | 0.266 | elovl6 | -0.069 |
| hoxd13a | 0.265 | ndr2 | -0.068 |
| lrrc17 | 0.265 | gsc | -0.068 |
| aplnr2 | 0.265 | ucmab | -0.068 |