| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.643 | rplp2 | -0.157 |
| hoxd9a | 0.558 | krt91 | -0.149 |
| hoxd12a | 0.556 | igfbp7 | -0.147 |
| hoxb7a | 0.551 | gapdhs | -0.146 |
| hoxa10b | 0.537 | eef1da | -0.141 |
| hoxb9a | 0.526 | rps29 | -0.138 |
| BX005254.3 | 0.517 | ahcy | -0.136 |
| LOC101882251 | 0.515 | capns1a | -0.135 |
| cdx4 | 0.514 | pvalb1 | -0.135 |
| hoxd11a | 0.503 | pvalb2 | -0.135 |
| sp8b | 0.497 | anxa2a | -0.134 |
| hoxa11b | 0.495 | nme2b.1 | -0.128 |
| hoxc11b | 0.485 | icn | -0.123 |
| ccdc3a | 0.467 | s100v1 | -0.120 |
| hoxc8a | 0.459 | epgn | -0.114 |
| hoxa9b | 0.452 | ociad2 | -0.114 |
| vcana | 0.446 | anxa1a | -0.112 |
| insl5a | 0.445 | rhbg | -0.112 |
| hoxc3a | 0.416 | gstm.3 | -0.110 |
| crabp2a | 0.414 | cxl34b.11 | -0.110 |
| nkx1.2la | 0.411 | si:dkey-33c14.3 | -0.110 |
| mllt3 | 0.408 | aqp3a | -0.108 |
| hoxc6b | 0.403 | meis1b | -0.108 |
| apela | 0.402 | cldnb | -0.108 |
| apoc1 | 0.396 | krt15 | -0.107 |
| hoxc10a | 0.396 | nfkbiaa | -0.106 |
| hoxd3a | 0.383 | zgc:158463 | -0.106 |
| emx2 | 0.379 | gsto2 | -0.105 |
| cdaa | 0.368 | eif4a1b | -0.105 |
| sp8a | 0.363 | ptmaa | -0.102 |
| sp9 | 0.362 | caspb | -0.102 |
| rgs3a | 0.361 | actc1b | -0.101 |
| hoxc11a | 0.359 | krtt1c19e | -0.101 |
| hoxa9a | 0.357 | fosb | -0.100 |
| hoxc9a | 0.352 | rpl38 | -0.099 |