| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.511 | gapdhs | -0.124 |
| hoxd12a | 0.509 | capns1a | -0.123 |
| hoxd10a | 0.485 | krt91 | -0.121 |
| hoxb7a | 0.457 | rplp2 | -0.119 |
| hoxa10b | 0.449 | igfbp7 | -0.112 |
| hoxa11b | 0.436 | aqp3a | -0.109 |
| hoxb9a | 0.416 | anxa2a | -0.109 |
| sp8b | 0.406 | eef1da | -0.108 |
| LOC101882251 | 0.406 | anxa1a | -0.106 |
| hoxc11a | 0.406 | krtt1c19e | -0.103 |
| ccdc3a | 0.401 | col1a1b | -0.100 |
| hoxd11a | 0.397 | s100v1 | -0.098 |
| hoxd9a | 0.395 | ahcy | -0.098 |
| cdx4 | 0.384 | pvalb1 | -0.097 |
| BX005254.3 | 0.381 | ptmaa | -0.096 |
| vcana | 0.380 | si:dkey-33c14.3 | -0.096 |
| nkx1.2la | 0.376 | rps29 | -0.096 |
| hoxc10a | 0.367 | pvalb2 | -0.094 |
| hoxa9b | 0.365 | rhbg | -0.093 |
| apela | 0.364 | col4a5 | -0.093 |
| insl5a | 0.347 | ak1 | -0.093 |
| mllt3 | 0.346 | epgn | -0.092 |
| hoxc8a | 0.340 | col4a6 | -0.091 |
| sp9 | 0.325 | capgb | -0.091 |
| rgs3a | 0.321 | cxl34b.11 | -0.090 |
| hoxa11a | 0.320 | cotl1 | -0.089 |
| hoxc3a | 0.318 | col14a1b | -0.089 |
| cdaa | 0.310 | rbp4 | -0.087 |
| XLOC-042222 | 0.309 | caspb | -0.086 |
| sp6 | 0.306 | gsto2 | -0.086 |
| crabp2a | 0.306 | aldh9a1a.1 | -0.084 |
| apoc1 | 0.300 | meis1b | -0.082 |
| emx3 | 0.299 | ociad2 | -0.081 |
| fibinb | 0.299 | gstm.3 | -0.081 |
| cxcr4a | 0.298 | pycard | -0.081 |