| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxa11b | 0.319 | hbae1.1 | -0.086 |
| hoxd12a | 0.305 | hbae3 | -0.082 |
| hoxd13a | 0.239 | hbbe1.3 | -0.081 |
| hoxd9a | 0.236 | hbbe2 | -0.080 |
| hoxa10b | 0.226 | hbae1.3 | -0.080 |
| hoxd10a | 0.220 | hbbe1.1 | -0.077 |
| hoxc12b | 0.216 | cahz | -0.075 |
| hoxa11a | 0.208 | hemgn | -0.073 |
| hoxc11a | 0.200 | hbbe1.2 | -0.072 |
| stab2 | 0.193 | blvrb | -0.072 |
| dab2 | 0.190 | alas2 | -0.067 |
| hoxb9a | 0.189 | slc4a1a | -0.067 |
| mrc1a | 0.183 | nt5c2l1 | -0.065 |
| aqp8a.1 | 0.182 | prdx2 | -0.064 |
| hoxc9a | 0.182 | si:ch211-250g4.3 | -0.062 |
| postnb | 0.181 | tspo | -0.061 |
| hoxd11a | 0.180 | nmt1b | -0.061 |
| hoxa9a | 0.179 | zgc:163057 | -0.061 |
| il13ra2 | 0.173 | epb41b | -0.059 |
| XLOC-042222 | 0.170 | gpx1a | -0.058 |
| gpr182 | 0.164 | si:ch211-207c6.2 | -0.054 |
| hoxb7a | 0.160 | plac8l1 | -0.054 |
| hoxa9b | 0.159 | fth1a | -0.053 |
| hoxb10a | 0.159 | creg1 | -0.051 |
| etv2 | 0.158 | tmod4 | -0.050 |
| slc22a7b.1 | 0.155 | si:ch211-227m13.1 | -0.049 |
| hoxc10a | 0.153 | hdr | -0.048 |
| tpcn3 | 0.151 | tmem14ca | -0.048 |
| mcamb | 0.147 | rfesd | -0.048 |
| ifi30 | 0.146 | hbae5 | -0.046 |
| c1qtnf6a | 0.145 | TCIM (1 of many) | -0.046 |
| cd99 | 0.144 | tfr1a | -0.045 |
| cfd | 0.142 | urod | -0.045 |
| slit3 | 0.141 | mibp2 | -0.045 |
| ap1s3b | 0.140 | klf1 | -0.044 |