| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc3a | 0.501 | marcksl1b | -0.201 |
| hoxc8a | 0.474 | fscn1a | -0.192 |
| gdf11 | 0.424 | stm | -0.190 |
| fgf20a | 0.396 | epcam | -0.181 |
| hoxd9a | 0.395 | shisa2a | -0.179 |
| si:ch211-129o18.4 | 0.391 | tbx16 | -0.177 |
| BX005254.3 | 0.389 | pitx2 | -0.175 |
| BX001014.2 | 0.383 | chrd | -0.174 |
| hoxd10a | 0.373 | si:ch73-160h15.3 | -0.174 |
| hoxb10a | 0.370 | cfl1l | -0.173 |
| fgf4 | 0.368 | si:ch211-152c2.3 | -0.171 |
| cdx4 | 0.360 | cst3 | -0.169 |
| nradd | 0.351 | pou5f3 | -0.167 |
| hoxc9a | 0.351 | nnr | -0.164 |
| hoxa9a | 0.350 | ddx4 | -0.164 |
| parvb | 0.349 | gsc | -0.160 |
| ptgdsb.1 | 0.347 | f11r.1 | -0.160 |
| hoxc6b | 0.344 | cdh1 | -0.158 |
| col15a1a | 0.335 | klf17 | -0.157 |
| alpi.1 | 0.335 | aldob | -0.156 |
| fibinb | 0.335 | h1m | -0.152 |
| hoxb9a | 0.334 | otx2a | -0.150 |
| sst6 | 0.332 | spint2 | -0.149 |
| b3gnt7l | 0.332 | si:ch1073-80i24.3 | -0.149 |
| selenon | 0.321 | frzb | -0.148 |
| sall4 | 0.321 | si:dkeyp-114g9.1 | -0.148 |
| aplnr2 | 0.317 | zic2b | -0.147 |
| fn1a | 0.307 | cmtm6 | -0.147 |
| ntd5 | 0.306 | s100a1 | -0.146 |
| fzd10 | 0.303 | si:ch211-173m16.2 | -0.146 |
| wnt5b | 0.300 | add3b | -0.145 |
| emid1 | 0.300 | si:ch1073-190k2.1 | -0.144 |
| ppp1r14c | 0.299 | fzd8b | -0.144 |
| myclb | 0.296 | oclna | -0.144 |
| her12 | 0.295 | zgc:56699 | -0.142 |