| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hes6 | 0.568 | fabp3 | -0.373 |
| cdx4 | 0.526 | actc1b | -0.362 |
| BX001014.2 | 0.525 | eef1da | -0.326 |
| itm2cb | 0.508 | ttn.2 | -0.317 |
| hoxc3a | 0.507 | ak1 | -0.307 |
| msgn1 | 0.493 | ckma | -0.307 |
| BX005254.3 | 0.491 | pabpc4 | -0.306 |
| cx43.4 | 0.487 | atp2a1 | -0.305 |
| apoc1 | 0.464 | ckmb | -0.302 |
| hoxc8a | 0.445 | mylpfa | -0.298 |
| si:ch73-281n10.2 | 0.432 | bhmt | -0.297 |
| her7 | 0.432 | tmem38a | -0.296 |
| apoeb | 0.416 | eno1a | -0.294 |
| hoxa9a | 0.403 | aldoab | -0.291 |
| nid2a | 0.401 | sparc | -0.291 |
| tbx16l | 0.401 | rpl37 | -0.290 |
| wnt5b | 0.393 | gamt | -0.286 |
| hmga1a | 0.392 | tnnc2 | -0.285 |
| fzd10 | 0.389 | eif4a1b | -0.283 |
| vox | 0.388 | gapdh | -0.282 |
| hmgb2a | 0.379 | acta1b | -0.281 |
| hmgn6 | 0.378 | tpi1b | -0.277 |
| cdx1a | 0.376 | myl1 | -0.276 |
| nop58 | 0.376 | neb | -0.274 |
| si:ch211-222l21.1 | 0.375 | pvalb1 | -0.273 |
| her12 | 0.373 | pvalb2 | -0.270 |
| hoxb10a | 0.370 | mylz3 | -0.268 |
| hoxc6b | 0.367 | tpma | -0.268 |
| hnrnpaba | 0.367 | vdac3 | -0.266 |
| hmgn7 | 0.366 | srl | -0.266 |
| syncrip | 0.366 | zgc:158463 | -0.266 |
| nucks1a | 0.363 | ttn.1 | -0.266 |
| her1 | 0.362 | nme2b.2 | -0.265 |
| ncl | 0.362 | ldb3a | -0.265 |
| dkc1 | 0.361 | CABZ01078594.1 | -0.263 |