| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb8a | 0.500 | agr2 | -0.140 |
| hoxb9a | 0.446 | col2a1a | -0.133 |
| hoxc3a | 0.420 | stm | -0.130 |
| hoxc8a | 0.362 | otomp | -0.130 |
| hoxb6a | 0.306 | col9a2 | -0.122 |
| hoxc9a | 0.278 | si:dkey-98f17.3 | -0.112 |
| hoxb3a | 0.237 | col11a1a | -0.111 |
| hoxc6a | 0.232 | bricd5 | -0.110 |
| cxcr4b | 0.219 | sox10 | -0.110 |
| hs3st3b1a | 0.198 | col9a1a | -0.106 |
| clcf1 | 0.196 | col9a3 | -0.103 |
| hoxb5a | 0.194 | tbx2b | -0.098 |
| anxa4 | 0.193 | col9a1b | -0.098 |
| anos1a | 0.183 | efhd1 | -0.098 |
| hoxb10a | 0.182 | sparc | -0.098 |
| met | 0.182 | atp1a1a.4 | -0.098 |
| gsnb | 0.177 | FP017215.1 | -0.098 |
| runx3 | 0.175 | slc4a4b | -0.096 |
| krt18b | 0.175 | col2a1b | -0.095 |
| her12 | 0.172 | si:ch211-243g18.2 | -0.094 |
| XLOC-013964 | 0.168 | cldna | -0.094 |
| capn8 | 0.165 | matn4 | -0.093 |
| itga6b | 0.159 | si:ch211-80h18.1 | -0.091 |
| pkdccb | 0.159 | acbd7 | -0.091 |
| anxa5b | 0.158 | hmga2 | -0.090 |
| sash1a | 0.156 | id3 | -0.087 |
| LOC110438342 | 0.154 | si:dkey-16l2.17 | -0.086 |
| cdx4 | 0.154 | meis1b | -0.086 |
| syt1b | 0.152 | AL954322.2 | -0.085 |
| vipr1a | 0.151 | mdka | -0.084 |
| lgals3b | 0.150 | ephb3 | -0.084 |
| LOC100007813 | 0.149 | wfdc2 | -0.083 |
| XLOC-000431 | 0.148 | cahz | -0.082 |
| LOC108181107 | 0.147 | LOC101882875 | -0.082 |
| BX005461.2 | 0.145 | col15a1b | -0.080 |