| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.531 | gapdhs | -0.163 |
| hoxd12a | 0.496 | krt91 | -0.154 |
| hoxd10a | 0.495 | capns1a | -0.146 |
| hoxa10b | 0.493 | krtt1c19e | -0.137 |
| hoxb7a | 0.470 | rplp2 | -0.136 |
| ccdc3a | 0.437 | anxa2a | -0.131 |
| hoxc11b | 0.436 | si:dkey-33c14.3 | -0.129 |
| sp8b | 0.435 | anxa1a | -0.128 |
| hoxd11a | 0.431 | igfbp7 | -0.124 |
| hoxb9a | 0.412 | aqp3a | -0.121 |
| LOC101882251 | 0.411 | eef1da | -0.120 |
| hoxc11a | 0.407 | rbp4 | -0.119 |
| vcana | 0.401 | col1a1b | -0.119 |
| hoxa9b | 0.400 | ahcy | -0.118 |
| hoxd9a | 0.396 | cxl34b.11 | -0.118 |
| BX005254.3 | 0.393 | s100v1 | -0.117 |
| hoxc10a | 0.387 | pvalb1 | -0.116 |
| sp9 | 0.382 | capgb | -0.116 |
| apela | 0.380 | ak1 | -0.115 |
| nkx1.2la | 0.375 | col4a5 | -0.112 |
| sp6 | 0.374 | col14a1b | -0.112 |
| rgs3a | 0.370 | pvalb2 | -0.111 |
| cdx4 | 0.370 | col4a6 | -0.111 |
| XLOC-042222 | 0.369 | rhbg | -0.108 |
| mllt3 | 0.355 | epgn | -0.108 |
| hoxd13a | 0.346 | ptmaa | -0.107 |
| insl5a | 0.345 | zgc:136930 | -0.102 |
| fibinb | 0.343 | si:ch211-39i22.1 | -0.102 |
| cxcr4a | 0.338 | caspb | -0.102 |
| hoxc8a | 0.334 | lgals1l1 | -0.101 |
| hoxa11a | 0.330 | aldh9a1a.1 | -0.101 |
| emx3 | 0.328 | pycard | -0.101 |
| apoc1 | 0.323 | cotl1 | -0.100 |
| tcf7 | 0.315 | s100v2 | -0.099 |
| hoxa9a | 0.312 | krt5 | -0.097 |