| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdx4 | 0.180 | gpm6aa | -0.072 |
| sp6 | 0.165 | elavl3 | -0.069 |
| nid2a | 0.159 | ckbb | -0.068 |
| cdx1a | 0.153 | rtn1a | -0.066 |
| msgn1 | 0.153 | stmn1b | -0.065 |
| apoeb | 0.149 | tuba1c | -0.065 |
| apoc1 | 0.148 | tmsb | -0.062 |
| nradd | 0.140 | pvalb1 | -0.060 |
| hspb1 | 0.133 | pvalb2 | -0.059 |
| vcana | 0.132 | gpm6ab | -0.057 |
| vox | 0.132 | actc1b | -0.056 |
| msx1b | 0.130 | hbbe1.3 | -0.055 |
| tbx16l | 0.130 | krtt1c19e | -0.055 |
| BX927258.1 | 0.129 | fabp3 | -0.053 |
| frem2a | 0.128 | myt1b | -0.053 |
| wnt5b | 0.128 | nova2 | -0.053 |
| lamb1a | 0.125 | cadm3 | -0.051 |
| ved | 0.118 | myt1a | -0.051 |
| cx43.4 | 0.116 | rnasekb | -0.051 |
| wu:fb97g03 | 0.116 | gng3 | -0.050 |
| BX005254.3 | 0.115 | hbae3 | -0.050 |
| LOC101882251 | 0.115 | scrt2 | -0.049 |
| her7 | 0.114 | hbae1.1 | -0.048 |
| dkk1b | 0.113 | si:ch211-195b11.3 | -0.047 |
| wls | 0.113 | sncb | -0.047 |
| npm1a | 0.112 | elavl4 | -0.046 |
| sp5l | 0.112 | gapdhs | -0.046 |
| nop58 | 0.109 | atp6v0cb | -0.045 |
| frem1a | 0.108 | epb41a | -0.045 |
| hoxb7a | 0.108 | icn2 | -0.045 |
| glsl | 0.106 | mylpfa | -0.045 |
| id1 | 0.106 | dpysl3 | -0.044 |
| tbx16 | 0.105 | vamp2 | -0.044 |
| dkc1 | 0.104 | aep1 | -0.043 |
| egfl6 | 0.104 | si:dkeyp-75h12.5 | -0.043 |