| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxd9a | 0.370 | hbae1.1 | -0.117 |
| hoxd10a | 0.366 | hbbe1.3 | -0.114 |
| hoxb10a | 0.340 | hbae3 | -0.114 |
| hoxa10b | 0.338 | hbbe2 | -0.111 |
| hoxa11a | 0.333 | hbae1.3 | -0.109 |
| hoxc11b | 0.319 | hbbe1.1 | -0.109 |
| hoxb7a | 0.313 | cahz | -0.106 |
| hoxb9a | 0.304 | hemgn | -0.105 |
| hoxd12a | 0.296 | blvrb | -0.103 |
| hoxc11a | 0.295 | hbbe1.2 | -0.099 |
| hoxa9a | 0.283 | slc4a1a | -0.094 |
| hoxd11a | 0.279 | alas2 | -0.093 |
| BX005254.3 | 0.256 | tspo | -0.092 |
| hoxc3a | 0.254 | prdx2 | -0.091 |
| hoxc10a | 0.252 | si:ch211-250g4.3 | -0.088 |
| fbln1 | 0.250 | nt5c2l1 | -0.088 |
| stab2 | 0.244 | gpx1a | -0.087 |
| mnx1 | 0.244 | epb41b | -0.084 |
| hoxa9b | 0.238 | si:ch211-207c6.2 | -0.082 |
| dab2 | 0.230 | zgc:163057 | -0.081 |
| hoxc9a | 0.229 | creg1 | -0.078 |
| il13ra2 | 0.228 | nmt1b | -0.078 |
| XLOC-042222 | 0.227 | fth1a | -0.077 |
| etv2 | 0.225 | tmod4 | -0.074 |
| postnb | 0.222 | plac8l1 | -0.074 |
| mrc1a | 0.212 | si:ch211-227m13.1 | -0.070 |
| tbxtb | 0.206 | klf1 | -0.068 |
| fgf10b | 0.198 | add2 | -0.061 |
| wnt2bb | 0.191 | tmem14ca | -0.061 |
| hoxd3a | 0.189 | mibp2 | -0.060 |
| chodl | 0.187 | ucp3 | -0.060 |
| dact2 | 0.187 | si:dkey-240n22.3 | -0.060 |
| gpr182 | 0.186 | hbae5 | -0.059 |
| mafa | 0.181 | tfr1a | -0.059 |
| ifi30 | 0.181 | sptb | -0.059 |