| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxd10a | 0.478 | actc1b | -0.202 |
| hoxb10a | 0.467 | ttn.2 | -0.200 |
| hoxa10b | 0.414 | ak1 | -0.190 |
| hoxa11a | 0.394 | ckma | -0.189 |
| hoxd12a | 0.392 | atp2a1 | -0.187 |
| her1 | 0.377 | gapdh | -0.187 |
| hoxd11a | 0.365 | ckmb | -0.181 |
| itm2cb | 0.360 | tmem38a | -0.181 |
| hoxd9a | 0.358 | tnnc2 | -0.180 |
| BX005254.3 | 0.357 | mylpfa | -0.180 |
| her12 | 0.350 | pabpc4 | -0.177 |
| hoxc11a | 0.350 | aldoab | -0.176 |
| pcdh8 | 0.332 | neb | -0.174 |
| hoxc10a | 0.328 | eno1a | -0.174 |
| hoxd3a | 0.312 | si:ch73-367p23.2 | -0.173 |
| sall4 | 0.302 | acta1b | -0.173 |
| hoxc11b | 0.301 | myl1 | -0.172 |
| ephb3 | 0.300 | nme2b.2 | -0.171 |
| hnrnpa0l | 0.298 | mylz3 | -0.168 |
| her7 | 0.295 | ttn.1 | -0.166 |
| fbln1 | 0.283 | ldb3b | -0.166 |
| tspan7 | 0.277 | srl | -0.166 |
| hoxb7a | 0.275 | pvalb1 | -0.165 |
| hes6 | 0.275 | si:ch211-152c2.3 | -0.165 |
| h3f3a | 0.274 | pvalb2 | -0.165 |
| XLOC-042222 | 0.273 | tnnt3b | -0.164 |
| rarga | 0.266 | ldb3a | -0.163 |
| nid2a | 0.263 | actn3a | -0.163 |
| LO016987.2 | 0.262 | tpma | -0.162 |
| greb1 | 0.261 | hhatla | -0.162 |
| hoxa9b | 0.256 | ank1a | -0.162 |
| phgdh | 0.254 | gamt | -0.161 |
| apoc1 | 0.254 | mybphb | -0.161 |
| msgn1 | 0.248 | actn3b | -0.161 |
| ewsr1b | 0.245 | myom1a | -0.160 |