| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxa10b | 0.199 | hmgb2a | -0.017 |
| hoxd9a | 0.185 | chaf1a | -0.015 |
| hoxd10a | 0.163 | rorb | -0.014 |
| hoxc10a | 0.154 | mcm3 | -0.013 |
| hoxd11a | 0.154 | pcna | -0.013 |
| hoxd12a | 0.133 | lig1 | -0.013 |
| hoxa9b | 0.129 | mcm5 | -0.013 |
| hoxc11a | 0.123 | si:ch211-156b7.4 | -0.013 |
| hoxa9a | 0.122 | dek | -0.013 |
| hoxa11a | 0.122 | slbp | -0.013 |
| XLOC-019120 | 0.116 | rpa3 | -0.013 |
| mnx2b | 0.115 | orc4 | -0.012 |
| hoxa13b | 0.111 | armc1l | -0.012 |
| hoxb9a | 0.106 | cadm3 | -0.012 |
| AL844563.1 | 0.102 | mcm4 | -0.012 |
| LOC100537368 | 0.100 | rfc2 | -0.012 |
| hoxc12b | 0.099 | cdc6 | -0.012 |
| hoxc11b | 0.093 | mcm6 | -0.012 |
| hoxb10a | 0.093 | mcm2 | -0.012 |
| dao.1 | 0.092 | si:ch211-152c2.3 | -0.012 |
| mhc1lja | 0.084 | esco2 | -0.012 |
| col5a2a | 0.083 | si:ch211-284e13.6 | -0.011 |
| hoxb13a | 0.083 | dhfr | -0.011 |
| hoxd3a | 0.082 | neurod4 | -0.011 |
| hoxc13a | 0.078 | rrm1 | -0.011 |
| BX248318.1 | 0.078 | XLOC-042899 | -0.011 |
| pmp22a | 0.077 | yaf2 | -0.011 |
| crestin | 0.077 | ephb6 | -0.011 |
| si:ch211-132b12.2 | 0.076 | kpnb1 | -0.011 |
| BX649434.1 | 0.075 | kat8 | -0.011 |
| hoxc3a | 0.075 | nuf2 | -0.011 |
| LOC101886161 | 0.075 | cdca7b | -0.011 |
| mmp2 | 0.074 | alyref | -0.011 |
| BX088583.2 | 0.073 | cdca7a | -0.011 |
| CU929150.1 | 0.073 | hells | -0.011 |