| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.648 | gapdhs | -0.200 |
| cdx4 | 0.636 | rplp2 | -0.198 |
| BX005254.3 | 0.578 | krt91 | -0.194 |
| hoxd10a | 0.558 | eef1da | -0.189 |
| hoxb7a | 0.551 | anxa2a | -0.182 |
| hoxb9a | 0.547 | capns1a | -0.181 |
| hoxc8a | 0.540 | anxa1a | -0.170 |
| apoc1 | 0.514 | rps29 | -0.166 |
| hoxa10b | 0.506 | igfbp7 | -0.164 |
| LOC101882251 | 0.506 | aqp3a | -0.160 |
| sp8b | 0.483 | s100v1 | -0.159 |
| insl5a | 0.475 | krtt1c19e | -0.154 |
| hoxa9b | 0.468 | ahcy | -0.153 |
| hoxd12a | 0.467 | icn | -0.152 |
| hoxd11a | 0.462 | col1a1b | -0.150 |
| hoxc6b | 0.447 | capgb | -0.147 |
| hoxc3a | 0.439 | pvalb1 | -0.146 |
| crabp2a | 0.429 | pvalb2 | -0.143 |
| mllt3 | 0.427 | col1a2 | -0.143 |
| sp8a | 0.425 | col4a6 | -0.142 |
| emx2 | 0.417 | epgn | -0.142 |
| vcana | 0.412 | cxl34b.11 | -0.140 |
| hoxd3a | 0.409 | s100v2 | -0.139 |
| hoxa11b | 0.396 | col4a5 | -0.137 |
| hoxc11b | 0.395 | si:dkey-33c14.3 | -0.137 |
| nradd | 0.395 | gstm.3 | -0.136 |
| tmeff1b | 0.390 | col1a1a | -0.136 |
| ccdc3a | 0.385 | cotl1 | -0.135 |
| hoxa9a | 0.384 | col14a1b | -0.130 |
| prickle1a | 0.369 | rhbg | -0.129 |
| BX927258.1 | 0.365 | ak1 | -0.129 |
| hoxc9a | 0.362 | s100a10b | -0.127 |
| tpm4a | 0.355 | sparc | -0.127 |
| nkx1.2la | 0.352 | nme2b.1 | -0.124 |
| BX005254.2 | 0.344 | si:ch211-105c13.3 | -0.124 |