| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.577 | gapdhs | -0.134 |
| hoxd10a | 0.503 | capns1a | -0.130 |
| hoxb7a | 0.494 | krt91 | -0.125 |
| BX005254.3 | 0.490 | aqp3a | -0.124 |
| hoxd12a | 0.483 | rplp2 | -0.124 |
| hoxa10b | 0.479 | igfbp7 | -0.122 |
| hoxd9a | 0.462 | eef1da | -0.120 |
| cdx4 | 0.460 | anxa2a | -0.120 |
| hoxb9a | 0.442 | anxa1a | -0.117 |
| hoxa11b | 0.431 | cotl1 | -0.113 |
| hoxa9b | 0.423 | s100v1 | -0.111 |
| LOC101882251 | 0.415 | pvalb1 | -0.108 |
| sp8b | 0.413 | krtt1c19e | -0.105 |
| hoxc11b | 0.397 | rps29 | -0.104 |
| hoxc8a | 0.396 | col4a6 | -0.104 |
| insl5a | 0.390 | col1a1b | -0.104 |
| crabp2a | 0.363 | col4a5 | -0.103 |
| apela | 0.352 | ahcy | -0.103 |
| hoxc6b | 0.349 | pvalb2 | -0.102 |
| nkx1.2la | 0.348 | capgb | -0.102 |
| vcana | 0.345 | s100a10b | -0.100 |
| apoc1 | 0.343 | si:dkey-33c14.3 | -0.098 |
| ccdc3a | 0.339 | ptmaa | -0.097 |
| hoxc3a | 0.339 | gsto2 | -0.093 |
| emx2 | 0.338 | ak1 | -0.093 |
| mllt3 | 0.333 | cxl34b.11 | -0.093 |
| hoxc10a | 0.318 | ociad2 | -0.092 |
| hoxa9a | 0.318 | icn | -0.092 |
| cdaa | 0.318 | actc1b | -0.091 |
| sp5l | 0.313 | rhbg | -0.090 |
| hoxd3a | 0.311 | s100v2 | -0.090 |
| emx3 | 0.305 | fosb | -0.090 |
| BX005254.2 | 0.300 | sparc | -0.090 |
| sp8a | 0.299 | pycard | -0.089 |
| hoxc11a | 0.297 | meis1b | -0.089 |