| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb9a | 0.302 | ttn.2 | -0.236 |
| hoxb10a | 0.297 | ttn.1 | -0.226 |
| hoxc3a | 0.271 | actc1b | -0.223 |
| hoxd9a | 0.265 | atp2a1 | -0.215 |
| hoxc8a | 0.263 | tmem38a | -0.211 |
| hoxb7a | 0.259 | ckma | -0.208 |
| hoxd10a | 0.258 | ak1 | -0.206 |
| hoxa10b | 0.251 | aldoab | -0.205 |
| hoxa9a | 0.245 | ckmb | -0.204 |
| itm2cb | 0.245 | tnnc2 | -0.203 |
| hoxa9b | 0.238 | pabpc4 | -0.203 |
| wls | 0.233 | gapdh | -0.201 |
| her12 | 0.225 | neb | -0.200 |
| hes6 | 0.224 | myl1 | -0.197 |
| hoxa11b | 0.221 | mylpfa | -0.193 |
| hsp90ab1 | 0.219 | acta1b | -0.192 |
| wnt5b | 0.217 | mybphb | -0.192 |
| BX005254.3 | 0.215 | si:ch73-367p23.2 | -0.190 |
| ppib | 0.213 | ldb3a | -0.189 |
| hoxc10a | 0.212 | srl | -0.188 |
| tubb4b | 0.209 | desma | -0.188 |
| ptmab | 0.208 | ldb3b | -0.186 |
| ubc | 0.207 | nme2b.2 | -0.186 |
| hoxd3a | 0.207 | gamt | -0.186 |
| cx43.4 | 0.204 | actn3b | -0.186 |
| hoxd11a | 0.204 | tnnt3a | -0.185 |
| si:ch211-222l21.1 | 0.202 | tpma | -0.185 |
| hoxd12a | 0.198 | eno1a | -0.184 |
| tuba8l4 | 0.198 | klhl41b | -0.184 |
| h3f3d | 0.197 | cav3 | -0.182 |
| her1 | 0.196 | zgc:101853 | -0.181 |
| cyp26a1 | 0.195 | hhatla | -0.180 |
| ran | 0.194 | actn3a | -0.180 |
| tubb2b | 0.194 | CABZ01078594.1 | -0.179 |
| phgdh | 0.193 | mylz3 | -0.179 |