| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb9a | 0.219 | anp32e | -0.019 |
| hoxa9b | 0.155 | mt-co2 | -0.019 |
| hoxd9a | 0.155 | NC-002333.4 | -0.018 |
| hoxb10a | 0.153 | foxg1b | -0.016 |
| hoxc3a | 0.149 | mt-cyb | -0.015 |
| hoxa9a | 0.147 | rorab | -0.015 |
| hoxa10b | 0.140 | mt-atp6 | -0.014 |
| hoxb8a | 0.127 | COX3 | -0.014 |
| hoxb7a | 0.125 | nrxn3b | -0.013 |
| hoxc10a | 0.111 | gnao1b | -0.013 |
| hoxc8a | 0.109 | nrn1lb | -0.013 |
| pmp22a | 0.103 | mt-nd1 | -0.013 |
| col5a2a | 0.100 | mcmbp | -0.013 |
| BX248318.1 | 0.094 | aif1l | -0.013 |
| col5a1 | 0.093 | rorb | -0.012 |
| hoxd10a | 0.093 | tpx2 | -0.012 |
| hoxd3a | 0.092 | trpm1a | -0.012 |
| serpinf1 | 0.092 | mpp6b | -0.012 |
| meis1a | 0.090 | mcm2 | -0.012 |
| si:ch211-134a4.6 | 0.090 | cadm3 | -0.012 |
| hoxd11a | 0.089 | dscc1 | -0.012 |
| mxra8b | 0.089 | bhlhe23 | -0.012 |
| col1a1b | 0.088 | six3a | -0.012 |
| tnn | 0.088 | nasp | -0.012 |
| col1a2 | 0.088 | mybl1 | -0.012 |
| dcn | 0.087 | ccna2 | -0.011 |
| LOC101885108 | 0.087 | chaf1a | -0.011 |
| hoxa3a | 0.086 | cabp2a | -0.011 |
| vwde | 0.085 | actc1b | -0.011 |
| ednrab | 0.085 | mcm3 | -0.011 |
| col21a1 | 0.081 | CABZ01005379.1 | -0.011 |
| postnb | 0.081 | zgc:110045 | -0.011 |
| hapln1a | 0.080 | shisa2a | -0.011 |
| tuba8l3 | 0.078 | pcbp3 | -0.011 |
| emilin2b | 0.078 | got1 | -0.011 |