tubb2b (all cells): Daniocell

Daniocell

tubb2b (all cells)

"tubulin, beta 2b" ZFIN

Gene expression UMAP

Download UMAP

UMAP projection of cells, colored by gene expression. The stage control can be used to switch cells to be colored by developmental stage. Mousing over the plot will highlight and identify particular tissues or clusters.

Other cell groups

The data was divided into different tissues based on cluster identity, transcriptional similarity, developmental stage, and established literature. Each of these groups was reanalyzed separately and can be viewed to investigate gene expression in more high resolution clusters.

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Expression, over time, within cell clusters or tissues. Size represents the portion of cells from that cluster and timepoint that have expression >0, while color represents the mean expression level in cells from that cluster and timepoint.

Correlated gene expression

Gene expression was correlated across all cells in the selected tissue to identify genes with the most similar (or dissimilar) expression. These results are specific to the all cells and each tissue view for a given gene.

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