| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ednrab | 0.277 | rorb | -0.025 |
| crestin | 0.261 | anp32e | -0.021 |
| hoxb8a | 0.254 | pax6a | -0.019 |
| hoxb9a | 0.218 | cadm3 | -0.018 |
| hoxb7a | 0.197 | ptmab | -0.018 |
| BX248318.1 | 0.185 | sox18 | -0.017 |
| hoxc8a | 0.185 | six6b | -0.017 |
| hoxb6a | 0.167 | pax6b | -0.017 |
| hoxd9a | 0.152 | foxg1b | -0.016 |
| hoxc9a | 0.149 | COX3 | -0.016 |
| LOC110438542 | 0.147 | atp5mf | -0.016 |
| XLOC-001964 | 0.139 | atp5mc3b | -0.016 |
| pmp22a | 0.135 | si:ch211-137a8.4 | -0.015 |
| col5a2a | 0.132 | hmx4 | -0.015 |
| hoxd3a | 0.132 | fabp7a | -0.014 |
| hoxa3a | 0.124 | tpma | -0.014 |
| LOC108179355 | 0.123 | mt-co2 | -0.014 |
| olfcg4 | 0.123 | mdh1aa | -0.013 |
| erbb3b | 0.121 | atp5f1b | -0.013 |
| msx1b | 0.120 | six3a | -0.013 |
| inka1a | 0.120 | usp54a | -0.013 |
| hoxb3a | 0.119 | celsr1b | -0.013 |
| hoxb8b | 0.119 | pdcl | -0.013 |
| si:dkey-19a16.13 | 0.119 | pvalb2 | -0.013 |
| hoxb10a | 0.118 | LOC110439258 | -0.013 |
| hoxa9a | 0.116 | mpp6b | -0.013 |
| hoxb5a | 0.115 | si:ch211-195b13.1 | -0.013 |
| hoxb1b | 0.114 | fzd5 | -0.012 |
| slc1a3a | 0.113 | otx2b | -0.012 |
| mov10b.1 | 0.113 | cldn5b | -0.012 |
| hoxc4a | 0.109 | mybl1 | -0.012 |
| hoxb6b | 0.109 | hmx1 | -0.012 |
| sox10 | 0.107 | tmpob | -0.012 |
| pax3a | 0.106 | skp2 | -0.012 |
| tuba8l3 | 0.106 | si:ch73-1a9.3 | -0.012 |