| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hmx4 | 0.481 | zgc:162730 | -0.057 |
| pax6b | 0.230 | tuba8l2 | -0.055 |
| rorb | 0.206 | ahnak | -0.054 |
| si:ch211-129p13.1 | 0.203 | sdc4 | -0.054 |
| foxg1b | 0.202 | aldh9a1a.1 | -0.052 |
| pax6a | 0.201 | cd63 | -0.051 |
| six3b | 0.182 | hoxb3a | -0.051 |
| foxg1d | 0.174 | sox19a | -0.051 |
| rbpms2b | 0.167 | pfn1 | -0.049 |
| six6b | 0.166 | sparc | -0.049 |
| zgc:158291 | 0.163 | cfl1l | -0.048 |
| ahr1b | 0.154 | phlda2 | -0.048 |
| tkta | 0.154 | aldob | -0.047 |
| pax10 | 0.150 | krt8 | -0.047 |
| foxe3 | 0.149 | tmsb1 | -0.047 |
| rbpms2a | 0.148 | cebpb | -0.046 |
| gng13b | 0.139 | ucp2 | -0.046 |
| CR356246.1 | 0.137 | arhgdig | -0.045 |
| gja8b | 0.137 | cebpd | -0.045 |
| pcbp3 | 0.137 | selenow1 | -0.045 |
| isl2b | 0.135 | anxa1a | -0.044 |
| ephb6 | 0.131 | epcam | -0.044 |
| LOC101885188 | 0.130 | pax3a | -0.044 |
| acbd7 | 0.127 | pleca | -0.044 |
| vsx2 | 0.126 | pycard | -0.044 |
| XLOC-003718 | 0.126 | wu:fb18f06 | -0.044 |
| cadm3 | 0.122 | bzw1b | -0.043 |
| si:ch211-248l17.3 | 0.120 | cast | -0.043 |
| snap25b | 0.119 | hoxc3a | -0.043 |
| LOC110438076 | 0.118 | plecb | -0.043 |
| gpm6aa | 0.117 | capns1a | -0.042 |
| tbx2b | 0.115 | ckap4 | -0.042 |
| pou4f3 | 0.114 | eno3 | -0.042 |
| six3a | 0.113 | fosab | -0.042 |
| rorab | 0.112 | gsta.1 | -0.042 |