| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxd12a | 0.335 | igfbp7 | -0.106 |
| hoxa11b | 0.330 | gapdhs | -0.085 |
| hoxc10a | 0.329 | capns1a | -0.082 |
| hoxc11a | 0.322 | rhbg | -0.082 |
| hoxc11b | 0.320 | pvalb1 | -0.081 |
| ccdc3a | 0.315 | ociad2 | -0.081 |
| hoxd10a | 0.311 | pvalb2 | -0.077 |
| hoxa10b | 0.301 | rplp2 | -0.075 |
| hoxd13a | 0.292 | s100v1 | -0.075 |
| hoxb10a | 0.290 | krt91 | -0.074 |
| cxcr4a | 0.289 | krt15 | -0.074 |
| vcana | 0.279 | ahcy | -0.074 |
| rgs3a | 0.265 | anxa2a | -0.073 |
| hoxb7a | 0.254 | ptmaa | -0.070 |
| hoxc13a | 0.253 | jun | -0.070 |
| hoxd11a | 0.252 | cldnb | -0.068 |
| XLOC-042222 | 0.252 | gstm.3 | -0.068 |
| apela | 0.242 | cxl34b.11 | -0.067 |
| fibinb | 0.239 | si:dkey-33c14.3 | -0.066 |
| LOC101882251 | 0.239 | caspb | -0.065 |
| hoxb9a | 0.239 | meis1b | -0.065 |
| nkx1.2la | 0.236 | lxn | -0.065 |
| sp6 | 0.235 | socs3a | -0.064 |
| sp8b | 0.234 | gsto2 | -0.064 |
| crabp2a | 0.226 | ak1 | -0.063 |
| hoxd9a | 0.224 | actc1b | -0.062 |
| mllt3 | 0.221 | klf3 | -0.061 |
| hoxa9b | 0.218 | eppk1 | -0.061 |
| angptl7 | 0.217 | prdx2 | -0.061 |
| sp9 | 0.217 | gstp1 | -0.060 |
| frem3 | 0.214 | nme2b.1 | -0.060 |
| emx3 | 0.212 | fosb | -0.059 |
| hoxa9a | 0.200 | gstt1a | -0.058 |
| tcf7 | 0.200 | icn | -0.058 |
| BX005254.3 | 0.199 | nanos1 | -0.058 |