| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc11a | 0.159 | hnrnpa0b | -0.029 |
| hoxc10a | 0.129 | actb1 | -0.024 |
| hoxd11a | 0.123 | pfn2l | -0.023 |
| hoxd12a | 0.110 | ddx5 | -0.022 |
| hoxa11b | 0.110 | hdac1 | -0.022 |
| hoxd9a | 0.105 | hnrnpabb | -0.022 |
| XLOC-004932 | 0.097 | cfl1 | -0.021 |
| hoxd10a | 0.096 | hmgb3a | -0.021 |
| hoxc11b | 0.095 | atp5f1b | -0.020 |
| hoxa9a | 0.091 | actb2 | -0.020 |
| hoxa9b | 0.079 | h2afvb | -0.020 |
| hoxc13a | 0.078 | hnrnpa1a | -0.020 |
| hoxc12a | 0.076 | tubb5 | -0.020 |
| hoxb10a | 0.075 | gnb1b | -0.019 |
| hoxa10b | 0.072 | khdrbs1a | -0.019 |
| hoxb9a | 0.070 | celf2 | -0.018 |
| hoxa13a | 0.062 | marcksl1b | -0.018 |
| irgq2 | 0.060 | si:ch211-288g17.3 | -0.018 |
| clrn1 | 0.056 | si:dkey-276j7.1 | -0.018 |
| hoxc9a | 0.054 | chd4a | -0.018 |
| CR407585.1 | 0.052 | cct7 | -0.018 |
| hoxc12b | 0.051 | rhoab | -0.018 |
| dnaaf3 | 0.051 | cox7c | -0.018 |
| LOC559501 | 0.050 | oaz1b | -0.018 |
| BX005254.2 | 0.049 | atrx | -0.017 |
| BX005254.3 | 0.048 | oaz1a | -0.017 |
| XLOC-018935 | 0.048 | atp5mc3a | -0.017 |
| LOC108179520 | 0.046 | bzw1a | -0.017 |
| LOC101884462 | 0.045 | nucks1a | -0.017 |
| hoxa13b | 0.045 | atp5pd | -0.017 |
| LOC108190371 | 0.043 | ywhabl | -0.017 |
| LOC101885283 | 0.043 | eef1b2 | -0.017 |
| LOC110438219 | 0.043 | ran | -0.017 |
| CR391953.1 | 0.041 | fkbp1aa | -0.016 |
| BX511034.2 | 0.041 | ppiab | -0.016 |